RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 DNMT3LQ9UJW3 386 aa17.23■□□□□ 0.35
GCFC2-202ENST00000409857 PPP1R12AO14974 1030 aaPredicted RBP17.23■□□□□ 0.35
GCFC2-202ENST00000409857 KRT36O76013 467 aa17.23■□□□□ 0.35
GCFC2-202ENST00000409857 HAUS5O94927 633 aa17.23■□□□□ 0.35
GCFC2-202ENST00000409857 LAMP2P13473 410 aa17.23■□□□□ 0.35
GCFC2-202ENST00000409857 NCAM1P13591 858 aa17.23■□□□□ 0.35
GCFC2-202ENST00000409857 TCF3P15923 654 aa17.23■□□□□ 0.35
GCFC2-202ENST00000409857 NOS2P35228 1153 aa17.23■□□□□ 0.35
GCFC2-202ENST00000409857 KPNB1Q14974 876 aaKnown RBP17.23■□□□□ 0.35
GCFC2-202ENST00000409857 POTEHQ6S545 545 aa17.23■□□□□ 0.35
GCFC2-202ENST00000409857 RINLQ6ZS11 566 aa17.23■□□□□ 0.35
GCFC2-202ENST00000409857 TEX9Q8N6V9 391 aa17.23■□□□□ 0.35
GCFC2-202ENST00000409857 JOSD2Q8TAC2 188 aa17.23■□□□□ 0.35
GCFC2-202ENST00000409857 ZNF483Q8TF39 744 aaPredicted RBP17.23■□□□□ 0.35
GCFC2-202ENST00000409857 EDEM1Q92611 657 aa17.23■□□□□ 0.35
GCFC2-202ENST00000409857 BTBD10Q9BSF8 475 aa17.23■□□□□ 0.35
GCFC2-202ENST00000409857 TSSK1BQ9BXA7 367 aa17.23■□□□□ 0.35
GCFC2-202ENST00000409857 SMOC2Q9H3U7 446 aa17.23■□□□□ 0.35
GCFC2-202ENST00000409857 DCLRE1BQ9H816 532 aa17.23■□□□□ 0.35
GCFC2-202ENST00000409857 TRPC7Q9HCX4 862 aa17.23■□□□□ 0.35
GCFC2-202ENST00000409857 SSU72Q9NP77 194 aaKnown RBP17.23■□□□□ 0.35
GCFC2-202ENST00000409857 NMRK1Q9NWW6 199 aa17.23■□□□□ 0.35
GCFC2-202ENST00000409857 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.23■□□□□ 0.35
GCFC2-202ENST00000409857 CAPN9O14815 690 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 GSC2O15499 205 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 PTPN7P35236 360 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 ARFIP2P53365 341 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 RCN1Q15293 331 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 MUM1Q2TAK8 710 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 C10orf120Q5SQS8 335 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 DEFB106AQ8N104 65 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 FAM71DQ8N9W8 422 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 NRG4Q8WWG1 115 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 RSAD2Q8WXG1 361 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 NT5C3BQ969T7 300 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 TTC17Q96AE7 1141 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 ZSWIM3Q96MP5 696 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 FAM111AQ96PZ2 611 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 TMEM120AQ9BXJ8 343 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 TRIM55Q9BYV6 548 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 RNF38Q9H0F5 515 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 XPO7Q9UIA9 1087 aaKnown RBP17.22■□□□□ 0.35
GCFC2-202ENST00000409857 ARHGAP26Q9UNA1 814 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 KIF26AQ9ULI4 1882 aaPredicted RBP17.22■□□□□ 0.35
GCFC2-202ENST00000409857 BGNP21810 368 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 PSMA2P25787 234 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 AVPR1AP37288 418 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 PIGHQ14442 188 aaPredicted RBP17.22■□□□□ 0.35
GCFC2-202ENST00000409857 ACSBG2Q5FVE4 666 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 KIAA1958Q8N8K9 716 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 ARL14EPQ8N8R7 260 aaPredicted RBP17.22■□□□□ 0.35
GCFC2-202ENST00000409857 ZSCAN18Q8TBC5 510 aaPredicted RBP17.22■□□□□ 0.35
GCFC2-202ENST00000409857 SMARCD2Q92925 531 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 E2F7Q96AV8 911 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 ASB16Q96NS5 453 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 PPCSQ9HAB8 311 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 OBP2AQ9NY56 170 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 DDX56Q9NY93 547 aaKnown RBP17.22■□□□□ 0.35
GCFC2-202ENST00000409857 STAP1Q9ULZ2 295 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 XIRP2A4UGR9 3374 aa17.22■□□□□ 0.35
GCFC2-202ENST00000409857 CCDC22O60826 627 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 GRAP2O75791 330 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 IGLV3-25P01717 112 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 CKMP06732 381 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 BASP1P80723 227 aaKnown RBP17.21■□□□□ 0.35
GCFC2-202ENST00000409857 SLC25A11Q02978 314 aaKnown RBP17.21■□□□□ 0.35
GCFC2-202ENST00000409857 ZBTB16Q05516 673 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 SPDYAQ5MJ70 313 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 PCGF5Q86SE9 256 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 EMC1Q8N766 993 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 TDRD5Q8NAT2 981 aaKnown RBP17.21■□□□□ 0.35
GCFC2-202ENST00000409857 ZNF398Q8TD17 642 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 DTX3LQ8TDB6 740 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 UCMAQ8WVF2 138 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 WDR60Q8WVS4 1066 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 SLC22A12Q96S37 553 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 NACA2Q9H009 215 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 VPS11Q9H270 941 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 ARMCX1Q9P291 453 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 PCSK1NQ9UHG2 260 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 C2CD4BA6NLJ0 364 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 TM9SF1O15321 606 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 GYG2O15488 501 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 LRCH4O75427 683 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 MT-ND3P03897 115 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 NEFHP12036 1026 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 KPNA1P52294 538 aaPredicted RBP17.21■□□□□ 0.35
GCFC2-202ENST00000409857 CCDC6Q16204 474 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 KLHL38Q2WGJ6 581 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 DCAF6Q58WW2 860 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 SYPL2Q5VXT5 272 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 RFX8Q6ZV50 586 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 LMNTD2Q8IXW0 634 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 FNIP1Q8TF40 1166 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 PGAP3Q96FM1 320 aaPredicted RBP17.21■□□□□ 0.35
GCFC2-202ENST00000409857 NSL1Q96IY1 281 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 CYP2S1Q96SQ9 504 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 NPY6RQ99463 290 aa17.21■□□□□ 0.35
GCFC2-202ENST00000409857 DPYSL4O14531 572 aa17.2■□□□□ 0.34
GCFC2-202ENST00000409857 NVLO15381 856 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms