RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 MX2P20592 715 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 RPA3P35244 121 aaPredicted RBP13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 WDR4P57081 412 aaKnown RBP13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 PPARDQ03181 441 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 ADIGQ0VDE8 80 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 DUSP4Q13115 394 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 PAFAH1B3Q15102 231 aaKnown RBP13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 PARP6Q2NL67 630 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 DCAF6Q58WW2 860 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 C4orf50Q6ZRC1 276 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 MTSS1LQ765P7 747 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 CHSY1Q86X52 802 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 SPATA2LQ8IUW3 424 aaPredicted RBP13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 BANPQ8N9N5 519 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 ATAD1Q8NBU5 361 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 GSDMBQ8TAX9 411 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 NETO1Q8TDF5 533 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 C2orf15Q8WU43 125 aaKnown RBP13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 SMARCD1Q96GM5 515 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 APOPT1Q96IL0 206 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 SPATA13Q96N96 652 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 RAB3IPQ96QF0 476 aaPredicted RBP13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 EBNA1BP2Q99848 306 aaKnown RBP13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 OSBPL6Q9BZF3 934 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 C10orf88Q9H8K7 445 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 CYP4F11Q9HBI6 524 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 MKS1Q9NXB0 559 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 ABI2Q9NYB9 513 aaPredicted RBP13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 MAFFQ9ULX9 164 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 SLC27A5Q9Y2P5 690 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 PCDHB5Q9Y5E4 795 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 TCRBV7S3A2A0A539 114 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 SDR42E2A6NKP2 422 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 ERI2A8K979 691 aaKnown RBP13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 M0QYT0 321 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 EEF2KO00418 725 aaKnown RBP13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 COPEO14579 308 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 PRRG1O14668 218 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 CCL16O15467 120 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 GABBR2O75899 941 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 SEC24AO95486 1093 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 IL1BP01584 269 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 TARSP26639 723 aaKnown RBP13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 HTR7P34969 479 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 SERPINB6P35237 376 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 TKTL1P51854 596 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 COG7P83436 770 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 SCAPQ12770 1279 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 MTAPQ13126 283 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 CA9Q16790 459 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 ANKRD20A2Q5SQ80 823 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 ANKRD20A1Q5TYW2 823 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 ANKRD20A3Q5VUR7 823 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 ATG16L1Q676U5 607 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 NCBP2-AS2Q69YL0 99 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 LRRC8BQ6P9F7 803 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 BEND5Q7L4P6 421 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 PACS2Q86VP3 889 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 CTAGE3PQ8IX95 158 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 FUKQ8N0W3 1084 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 C4orf33Q8N1A6 199 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 RAB3IL1Q8TBN0 382 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 SPPL2BQ8TCT7 592 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 RNF139Q8WU17 664 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 ZNF75CPQ92670 426 aaPredicted RBP13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 FGF13Q92913 245 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 CFAP36Q96G28 342 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 PCED1BQ96HM7 432 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 PPP1R2P1Q96PQ5 205 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 NELL2Q99435 816 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 VAT1Q99536 393 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 SLC40A1Q9NP59 571 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 MLXIPLQ9NP71 852 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 FBXW11Q9UKB1 542 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 ANGPTL2Q9UKU9 493 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 NDRG2Q9UN36 371 aaKnown RBP13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 CFAP47Q6ZTR5 3102 aa13.17□□□□□ -0.3
SMARCB1-203ENST00000407082 A0A1W2PPM1 405 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 CLDN5O00501 218 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 GDF9O60383 454 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 AP1G2O75843 785 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 RASSF9O75901 435 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 TGDSO95455 350 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 VNN2O95498 520 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 ATP5BP06576 529 aaKnown RBP13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 AMPD1P23109 780 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 BDNFP23560 247 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 HNRNPH1P31943 449 aaKnown RBP13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 FOXN2P32314 431 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 SLC8A1P32418 973 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 MAGEA3P43357 314 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 DAOAP59103 153 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 ZNF33AQ06730 810 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 IFRD2Q12894 506 aaPredicted RBP13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 BNIP1Q12981 228 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 SNCBQ16143 134 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 MGAT5BQ3V5L5 792 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 KBTBD12Q3ZCT8 623 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 GALNTL6Q49A17 601 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 PPM1LQ5SGD2 360 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms