RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 CHD6Q8TD26 2715 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 A0A0D9SEW6 157 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 F8VZ95 297 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 RIOK3O14730 519 aaKnown RBP16.71■□□□□ 0.27
DDR1-229ENST00000396342 WNT9AO14904 365 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 MT-CO1P00395 513 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 CCDC172P0C7W6 258 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 GLDCP23378 1020 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 STAT1P42224 750 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 SERPINH1P50454 418 aaKnown RBP16.71■□□□□ 0.27
DDR1-229ENST00000396342 IRAK1P51617 712 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 HNRNPKP61978 463 aaKnown RBP eCLIP16.71■□□□□ 0.27
DDR1-229ENST00000396342 SEMG2Q02383 582 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 KCNMA1Q12791 1236 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 TARDBPQ13148 414 aaKnown RBP eCLIP16.71■□□□□ 0.27
DDR1-229ENST00000396342 OR7D4Q8NG98 312 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 KLK6Q92876 244 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 RAB7BQ96AH8 199 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 IFT43Q96FT9 208 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 NRSN2Q9GZP1 204 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 ZDHHC6Q9H6R6 413 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 USP29Q9HBJ7 922 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 SEPT11Q9NVA2 429 aaKnown RBP16.71■□□□□ 0.27
DDR1-229ENST00000396342 DNAJC28Q9NX36 388 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 DONSONQ9NYP3 566 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 PPARGC1AQ9UBK2 798 aaKnown RBP16.71■□□□□ 0.27
DDR1-229ENST00000396342 OR12D3Q9UGF7 316 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 CLCA2Q9UQC9 943 aa16.71■□□□□ 0.27
DDR1-229ENST00000396342 MUC22E2RYF6 1773 aaPredicted RBP16.7■□□□□ 0.26
DDR1-229ENST00000396342 IGLV3-10A0A075B6K4 115 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 CXorf51AA0A1B0GTR3 108 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 ZSCAN5CA6NGD5 496 aaPredicted RBP16.7■□□□□ 0.26
DDR1-229ENST00000396342 GOLGA6L22H0YM25 854 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 K7ERQ8 282 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 FPGTO14772 594 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 LEFTY1O75610 366 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 GFPT2O94808 682 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 MMEP08473 750 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 XPAP23025 273 aaPredicted RBP16.7■□□□□ 0.26
DDR1-229ENST00000396342 ITGB7P26010 798 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 ACTN2P35609 894 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 FLT3P36888 993 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 MAPKAPK2P49137 400 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 METAP1P53582 386 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 SNRPD1P62314 119 aaKnown RBP16.7■□□□□ 0.26
DDR1-229ENST00000396342 ACAP1Q15027 740 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 SHBQ15464 509 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 CDO1Q16878 200 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 MIIPQ5JXC2 388 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 PIP5KL1Q5T9C9 394 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 SFMBT2Q5VUG0 894 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 DPY19L3Q6ZPD9 716 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 SPATS2Q86XZ4 545 aaKnown RBP16.7■□□□□ 0.26
DDR1-229ENST00000396342 OR52K2Q8NGK3 314 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 GLMNQ92990 594 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 PSMB7Q99436 277 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 SELENOOQ9BVL4 669 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 SLC17A9Q9BYT1 436 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 METTL5Q9NRN9 209 aaKnown RBP16.7■□□□□ 0.26
DDR1-229ENST00000396342 TAB2Q9NYJ8 693 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 HECAQ9UBI9 543 aaPredicted RBP16.7■□□□□ 0.26
DDR1-229ENST00000396342 HS3ST3A1Q9Y663 406 aa16.7■□□□□ 0.26
DDR1-229ENST00000396342 CACNA1GO43497 2377 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 FFAR2O15552 330 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 SMAD6O43541 496 aaKnown RBP16.69■□□□□ 0.26
DDR1-229ENST00000396342 TSPAN6O43657 245 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 RAMP2O60895 175 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 CAPNS1P04632 268 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 CALB1P05937 261 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 ADRB3P13945 408 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 RHOQP17081 205 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 CDK11BP21127 795 aaKnown RBP16.69■□□□□ 0.26
DDR1-229ENST00000396342 ACP1P24666 158 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 L1CAMP32004 1257 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 ANP32AP39687 249 aaKnown RBP16.69■□□□□ 0.26
DDR1-229ENST00000396342 RABIFP47224 123 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 POLR2FP61218 127 aaKnown RBP16.69■□□□□ 0.26
DDR1-229ENST00000396342 CDR2Q01850 454 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 COL9A2Q14055 689 aaPredicted RBP16.69■□□□□ 0.26
DDR1-229ENST00000396342 ZNF284Q2VY69 593 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 SASS6Q6UVJ0 657 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 NOP9Q86U38 636 aaKnown RBP16.69■□□□□ 0.26
DDR1-229ENST00000396342 MARCH9Q86YJ5 346 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 PAF1Q8N7H5 531 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 CHST14Q8NCH0 376 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 NEK11Q8NG66 645 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 OR4C6Q8NH72 309 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 ISG20Q96AZ6 181 aaKnown RBP16.69■□□□□ 0.26
DDR1-229ENST00000396342 ARRDC3Q96B67 414 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 TBC1D31Q96DN5 1066 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 OSBPL1AQ9BXW6 950 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 MAGEH1Q9H213 219 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 VPS16Q9H269 839 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 FAM207AQ9NSI2 230 aaPredicted RBP16.69■□□□□ 0.26
DDR1-229ENST00000396342 AJAP1Q9UKB5 411 aaPredicted RBP16.69■□□□□ 0.26
DDR1-229ENST00000396342 SNX10Q9Y5X0 201 aa16.69■□□□□ 0.26
DDR1-229ENST00000396342 FAM170AA1A519 330 aa16.68■□□□□ 0.26
DDR1-229ENST00000396342 KRIT1O00522 736 aa16.68■□□□□ 0.26
DDR1-229ENST00000396342 SIGLEC6O43699 453 aa16.68■□□□□ 0.26
DDR1-229ENST00000396342 POP4O95707 220 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms