RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 SPATA22Q8NHS9 363 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 VPS39Q96JC1 886 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 LRRC40Q9H9A6 602 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 STAP1Q9ULZ2 295 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 PCDHGC3Q9UN70 934 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 AP4S1Q9Y587 144 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 TSPAN1O60635 241 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 CRHR1P34998 444 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 GABRB2P47870 512 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 PITX1P78337 314 aaPredicted RBP13.42□□□□□ -0.26
NFKB1-202ENST00000394820 SLC6A3Q01959 620 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 FASTKQ14296 549 aaKnown RBP13.42□□□□□ -0.26
NFKB1-202ENST00000394820 CHSY1Q86X52 802 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 DENND6AQ8IWF6 608 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 MAGEE2Q8TD90 523 aaPredicted RBP13.42□□□□□ -0.26
NFKB1-202ENST00000394820 JADE3Q92613 823 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 TMIGD2Q96BF3 282 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 ZMAT2Q96NC0 199 aaKnown RBP13.42□□□□□ -0.26
NFKB1-202ENST00000394820 PKP2Q99959 881 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 DGCR6LQ9BY27 220 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 RNF39Q9H2S5 420 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 MMADHCQ9H3L0 296 aaPredicted RBP13.42□□□□□ -0.26
NFKB1-202ENST00000394820 PCDHA11Q9Y5I1 949 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 MCM3APO60318 1980 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 TFEBP19484 476 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 NFKBIAP25963 317 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 DCTN2Q13561 401 aaKnown RBP13.42□□□□□ -0.26
NFKB1-202ENST00000394820 FSTL4Q6MZW2 842 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 OTOP3Q7RTS5 596 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 COQ10BQ9H8M1 238 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 CNTN6Q9UQ52 1028 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 MICAL3Q7RTP6 2002 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 ZBTB14O43829 449 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 NFKB1P19838 968 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 GJA5P36382 358 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 RPL14P50914 215 aaKnown RBP13.42□□□□□ -0.26
NFKB1-202ENST00000394820 KLC3Q6P597 504 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 TFAP2DQ7Z6R9 452 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 TTC30AQ86WT1 665 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 MAPK15Q8TD08 544 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 GIPC3Q8TF64 312 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 DTNBP1Q96EV8 351 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 FICDQ9BVA6 458 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 POMKQ9H5K3 350 aa13.42□□□□□ -0.26
NFKB1-202ENST00000394820 SSC5DA1L4H1 1573 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 COL11A1P12107 1806 aaPredicted RBP13.41□□□□□ -0.26
NFKB1-202ENST00000394820 A0A1B0GTW7 788 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 F8W8V4 182 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 MRASO14807 208 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 UBDO15205 165 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 TGDSO95455 350 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 CD1EP15812 388 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 ZFXP17010 805 aaPredicted RBP13.41□□□□□ -0.26
NFKB1-202ENST00000394820 ITGADQ13349 1161 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 CCNIQ14094 377 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 IL23RQ5VWK5 629 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 TRNP1Q6NT89 227 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 GATA6Q92908 595 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 BHMTQ93088 406 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 CSPG4P5Q96PW8 444 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 PAIP2BQ9ULR5 123 aaKnown RBP13.41□□□□□ -0.26
NFKB1-202ENST00000394820 PCDHGB4Q9UN71 923 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 BTRCQ9Y297 605 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 PCDHGB5Q9Y5G0 923 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 PHIPQ8WWQ0 1821 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 TRDMT1O14717 391 aaKnown RBP13.41□□□□□ -0.26
NFKB1-202ENST00000394820 SRP72O76094 671 aaKnown RBP13.41□□□□□ -0.26
NFKB1-202ENST00000394820 SMPD1P17405 629 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 IL10P22301 178 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 SLC7A2P52569 658 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 SH3BGRP55822 239 aaPredicted RBP13.41□□□□□ -0.26
NFKB1-202ENST00000394820 PSME3P61289 254 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 MPP1Q00013 466 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 PPIL2Q13356 520 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 BFSP2Q13515 415 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 TSTA3Q13630 321 aaPredicted RBP13.41□□□□□ -0.26
NFKB1-202ENST00000394820 TBCCQ15814 346 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 XKR5Q6UX68 686 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 RNF139Q8WU17 664 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 PBXIP1Q96AQ6 731 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 NXNL1Q96CM4 212 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 NACA2Q9H009 215 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 ATAD5Q96QE3 1844 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 BTBD19C9JJ37 291 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 GSTA4O15217 222 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 TRMUO75648 421 aaKnown RBP13.41□□□□□ -0.26
NFKB1-202ENST00000394820 MT-CYBP00156 380 aaPredicted RBP13.41□□□□□ -0.26
NFKB1-202ENST00000394820 ALDOAP04075 364 aaKnown RBP13.41□□□□□ -0.26
NFKB1-202ENST00000394820 STMN1P16949 149 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 STT3AP46977 705 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 SLC26A2P50443 739 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 MAXP61244 160 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 GRM3Q14832 879 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 PQLC3Q8N755 202 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 MTG1Q9BT17 334 aaPredicted RBP13.41□□□□□ -0.26
NFKB1-202ENST00000394820 FAM96AQ9H5X1 160 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 ASB7Q9H672 318 aa13.41□□□□□ -0.26
NFKB1-202ENST00000394820 A0A0A0MRY4 1105 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 RGSL1A5PLK6 1076 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 J3QRK9 145 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms