RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 CTBP1Q13363 440 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 CYLC2Q14093 348 aaPredicted RBP12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 FSCBQ5H9T9 825 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 SLC41A1Q8IVJ1 513 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 LSMEM2Q8N112 164 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 MYO1HQ8N1T3 1032 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 MARVELD2Q8N4S9 558 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 APBB2Q92870 758 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 ABTB1Q969K4 478 aaPredicted RBP12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 SLC35B4Q969S0 331 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 LENG1Q96BZ8 264 aaPredicted RBP12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 DGCR14Q96DF8 476 aaKnown RBP12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 CELF6Q96J87 481 aaKnown RBP12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 CYP4F12Q9HCS2 524 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 PIGVQ9NUD9 493 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 PRMT7Q9NVM4 692 aaPredicted RBP12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 C9IYK1 514 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 M0QYT0 321 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 ATICP31939 592 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 CD68P34810 354 aaPredicted RBP12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 SERPINB8P50452 374 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 PLK1P53350 603 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 GJA9P57773 515 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 MPP1Q00013 466 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 PPP1R3AQ16821 1122 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 MAP3K21Q5TCX8 1036 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 SEL1L3Q68CR1 1132 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 KCNMB4Q86W47 210 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 TMEM151AQ8N4L1 468 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 LRTOMTQ8WZ04 291 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 CPNE1Q99829 537 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 MLPHQ9BV36 600 aaPredicted RBP12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 GCOM2Q9BZD3 368 aaPredicted RBP12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 TRIM8Q9BZR9 551 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 STN1Q9H668 368 aaKnown RBP12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 FZD10Q9ULW2 581 aa12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 COPG1Q9Y678 874 aaKnown RBP12.15□□□□□ -0.46
CCDC144CP-201ENST00000340196 TMEM221A6NGB7 291 aa12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 AURKAO14965 403 aa12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 VAPBO95292 243 aa12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 MCF2P10911 925 aa12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 PTPN3P26045 913 aa12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 GABRB3P28472 473 aa12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 GJA5P36382 358 aa12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 RARS2Q5T160 578 aaKnown RBP12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 MFSD6LQ8IWD5 586 aa12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 OR9I1Q8NGQ6 314 aa12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 SIKE1Q9BRV8 207 aa12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 ILKAPQ9H0C8 392 aaPredicted RBP12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 FAM49AQ9H0Q0 323 aaPredicted RBP12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 NXF3Q9H4D5 531 aaKnown RBP12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 VRTNQ9H8Y1 702 aa12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 CDHR5Q9HBB8 845 aa12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 OXSMQ9NWU1 459 aa12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 XPR1Q9UBH6 696 aa12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 SFMBT1Q9UHJ3 866 aa12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 RNF11Q9Y3C5 154 aa12.15□□□□□ -0.47
CCDC144CP-201ENST00000340196 RGSL1A5PLK6 1076 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 PIM1P11309 404 aaPredicted RBP12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 CDK4P11802 303 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 UGT1A6P19224 532 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 NFKB1P19838 968 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 ETFBP38117 255 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 PTPN9P43378 593 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 NR2C2P49116 596 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 DGKDQ16760 1214 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 STXBP5Q5T5C0 1151 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 SLC26A9Q7LBE3 791 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 OTOP3Q7RTS5 596 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 CLEC14AQ86T13 490 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 PIGZQ86VD9 579 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 NT5DC4Q86YG4 428 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 CEP97Q8IW35 865 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 SPATA22Q8NHS9 363 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 CENPIQ92674 756 aaPredicted RBP12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 RPL10LQ96L21 214 aaKnown RBP12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 BTBD9Q96Q07 612 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 SLC29A1Q99808 456 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 CIB1Q99828 191 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 ATXN3LQ9H3M9 355 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 ASB7Q9H672 318 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 RUVBL2Q9Y230 463 aaKnown RBP12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 SMIM31A0A1B0GVY4 71 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 HDAC3O15379 428 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 DENRO43583 198 aaKnown RBP12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 SLC25A27O95847 323 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 CKMT2P17540 419 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 SPRP35270 261 aaPredicted RBP12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 GARSP41250 739 aaKnown RBP12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 RPL14P50914 215 aaKnown RBP12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 NME5P56597 212 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 YBX1P67809 324 aaKnown RBP12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 FKBP1BP68106 108 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 PLOD1Q02809 727 aaPredicted RBP12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 CBX3Q13185 183 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 MAP7Q14244 749 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 CCDC153Q494R4 210 aa12.14□□□□□ -0.47
CCDC144CP-201ENST00000340196 MTX3Q5HYI7 312 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms