RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 DSG1Q02413 1049 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 CTBP1Q13363 440 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 PDE1CQ14123 709 aaPredicted RBP7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 PTPRCAPQ14761 206 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 POLD3Q15054 466 aaPredicted RBP7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 SEPT7Q16181 437 aaKnown RBP7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 TEDDM1Q5T9Z0 273 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 TXNDC8Q6A555 127 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 ITPRIPL1Q6GPH6 555 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 ATG14Q6ZNE5 492 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 SPATA21Q7Z572 469 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 DNAJB7Q7Z6W7 309 aaPredicted RBP7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 STRA8Q7Z7C7 330 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 DENND6AQ8IWF6 608 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 PLD6Q8N2A8 252 aaKnown RBP7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 LZTR1Q8N653 840 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 FITM2Q8N6M3 262 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 ATP6V0D2Q8N8Y2 350 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 EXOC2Q96KP1 924 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 PRICKLE1Q96MT3 831 aaPredicted RBP7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 FCRL5Q96RD9 977 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 VAT1Q99536 393 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 UNKQ9C0B0 810 aaKnown RBP7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 LRRC40Q9H9A6 602 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 ZNF334Q9HCZ1 680 aaPredicted RBP7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 IARS2Q9NSE4 1012 aaKnown RBP7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 C20orf96Q9NUD7 363 aaPredicted RBP7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 DCTN4Q9UJW0 460 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 DNMT3LQ9UJW3 386 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 MTO1Q9Y2Z2 717 aaKnown RBP7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 PLLPQ9Y342 182 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 USP15Q9Y4E8 981 aaPredicted RBP7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 DRGXA6NNA5 263 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 PRRG1O14668 218 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 AURKAO14965 403 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 MTSS1O43312 755 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 KRT38O76015 456 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 STC2O76061 302 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 VAPBO95292 243 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 PIRTP0C851 137 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 DHRS4L1P0CG22 281 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 SAT1P21673 171 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 TUFMP49411 452 aaKnown RBP7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 PSEN1P49768 467 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 WNT3AP56704 352 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 NRG1Q02297 640 aaPredicted RBP7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 CDH17Q12864 832 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 PTPRRQ15256 657 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 CNGA3Q16281 694 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 C1orf53Q5VUE5 145 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 FSTL4Q6MZW2 842 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 RANBP10Q6VN20 620 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 LRRC8CQ8TDW0 803 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 ZNF558Q96NG5 402 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 YME1L1Q96TA2 773 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 TBL1YQ9BQ87 522 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 MANSC1Q9H8J5 431 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 PRKAG3Q9UGI9 489 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 AFF4Q9UHB7 1163 aaKnown RBP7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 EMCNQ9ULC0 261 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 YIPF1Q9Y548 306 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 KCTD3Q9Y597 815 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 BACE2Q9Y5Z0 518 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 TANC1Q9C0D5 1861 aa7.52□□□□□ -1.21
SRFBP1-201ENST00000339397 CCT8L1PA6NM43 557 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 ZBBXA8MT70 800 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 WASH4PA8MWX3 477 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 EDF1O60869 148 aaKnown RBP7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 RAMP2O60895 175 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 SERPINB4P48594 390 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 COG7P83436 770 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 IRF9Q00978 393 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 HECTD3Q5T447 861 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 STXBP5Q5T5C0 1151 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 MARC1Q5VT66 337 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 CYS1Q717R9 158 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 MARK2Q7KZI7 788 aaKnown RBP7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 KCNMB4Q86W47 210 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 TNS4Q8IZW8 715 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 SPATA6LQ8N4H0 392 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 DCLK2Q8N568 766 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 RFWD2Q8NHY2 731 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 C11orf49Q9H6J7 331 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 SP110Q9HB58 689 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 TRPC7Q9HCX4 862 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 NPHS2Q9NP85 383 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 PPARGC1AQ9UBK2 798 aaKnown RBP7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 MYO9BQ13459 2157 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 ABHD14A-ACY1A0A1B0GW23 586 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 LCHNA4D1U4 455 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 H3BNC9 293 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 TM9SF1O15321 606 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 ACSL4O60488 711 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 NEBLO76041 1014 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 USP1O94782 785 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 UBOX5O94941 541 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 AHSGP02765 367 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 CNPP09543 421 aaKnown RBP7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 LINC00271P0C7V0 271 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms