RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 CLIP4Q8N3C7 705 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 S100A14Q9HCY8 104 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 ENOPH1Q9UHY7 261 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 TMCO1Q9UM00 188 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 ARAP3Q8WWN8 1544 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 LAMC1P11047 1609 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 H7C0S8 307 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 TNNI3P19429 210 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 MAZP56270 477 aaKnown RBP16.65■□□□□ 0.26
SMAD3-201ENST00000327367 CCDC157Q569K6 752 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 BAP1Q92560 729 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 TRPM5Q9NZQ8 1165 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 MYL9P24844 172 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 CCNFP41002 786 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 RTP1P59025 263 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 PJA1Q8NG27 643 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 CHIAQ9BZP6 476 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.65■□□□□ 0.26
SMAD3-201ENST00000327367 CARD8Q9Y2G2 431 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 UMODL1Q5DID0 1318 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 CCDC189A1A4V9 331 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 MAGEB2O15479 319 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 SLC5A3P53794 718 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 CDH17Q12864 832 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 TRMT11Q7Z4G4 463 aaKnown RBP16.65■□□□□ 0.26
SMAD3-201ENST00000327367 C10orf107Q8IVU9 208 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 TBC1D21Q8IYX1 336 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 CHPFQ8IZ52 775 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 DCP1BQ8IZD4 617 aaKnown RBP16.65■□□□□ 0.26
SMAD3-201ENST00000327367 HDAC2Q92769 488 aaKnown RBP16.65■□□□□ 0.26
SMAD3-201ENST00000327367 C3orf18Q9UK00 162 aa16.65■□□□□ 0.26
SMAD3-201ENST00000327367 USP42Q9H9J4 1324 aaKnown RBP16.64■□□□□ 0.26
SMAD3-201ENST00000327367 FAM240BA0A1B0GVZ2 78 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 LYNP07948 512 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 TCF4P15884 667 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 RHOAP61586 193 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 SNRPFP62306 86 aaKnown RBP16.64■□□□□ 0.25
SMAD3-201ENST00000327367 LIN52Q52LA3 116 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 IFNLR1Q8IU57 520 aaPredicted RBP16.64■□□□□ 0.25
SMAD3-201ENST00000327367 SAMD3Q8N6K7 520 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 EMID1Q96A84 441 aaPredicted RBP16.64■□□□□ 0.25
SMAD3-201ENST00000327367 TAMM41Q96BW9 452 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 GNEQ9Y223 722 aaKnown RBP16.64■□□□□ 0.25
SMAD3-201ENST00000327367 USP6P35125 1406 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 ECDO95905 644 aaPredicted RBP16.64■□□□□ 0.25
SMAD3-201ENST00000327367 EPORP19235 508 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 CYP24A1Q07973 514 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 PTCD3Q96EY7 689 aaKnown RBP16.64■□□□□ 0.25
SMAD3-201ENST00000327367 TMEM176AQ96HP8 235 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 TBC1D13Q9NVG8 400 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 METP08581 1390 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 BIVM-ERCC5R4GMW8 1640 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 WEE1P30291 646 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 SLC11A2P49281 568 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 PHC1P78364 1004 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 PPP1R26Q5T8A7 1209 aaPredicted RBP16.64■□□□□ 0.25
SMAD3-201ENST00000327367 GK5Q6ZS86 529 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 CD302Q8IX05 232 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 KBTBD7Q8WVZ9 684 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 KDM4BO94953 1096 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 MMP10P09238 476 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 TCF7P36402 384 aaPredicted RBP16.64■□□□□ 0.25
SMAD3-201ENST00000327367 NPTX2P47972 431 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 ADGRF2Q8IZF7 708 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 DSN1Q9H410 356 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 SAMHD1Q9Y3Z3 626 aaKnown RBP16.64■□□□□ 0.25
SMAD3-201ENST00000327367 SETD1BQ9UPS6 1966 aaKnown RBP16.64■□□□□ 0.25
SMAD3-201ENST00000327367 BUD23O43709 281 aaKnown RBP16.64■□□□□ 0.25
SMAD3-201ENST00000327367 VPS4BO75351 444 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 HNRNPLP14866 589 aaKnown RBP eCLIP16.64■□□□□ 0.256e-9■■□□□ 12.3
SMAD3-201ENST00000327367 HPCAL1P37235 193 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 PDK4Q16654 411 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 PTCHD4Q6ZW05 846 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 SPPL2CQ8IUH8 684 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 SLC34A3Q8N130 599 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 SLC17A7Q9P2U7 560 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 VPS28Q9UK41 221 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 MAPRE3Q9UPY8 281 aa16.64■□□□□ 0.25
SMAD3-201ENST00000327367 ATP7BP35670 1465 aa16.63■□□□□ 0.25
SMAD3-201ENST00000327367 MT-ND1P03886 318 aa16.63■□□□□ 0.25
SMAD3-201ENST00000327367 RXRGP48443 463 aa16.63■□□□□ 0.25
SMAD3-201ENST00000327367 MTAPQ13126 283 aa16.63■□□□□ 0.25
SMAD3-201ENST00000327367 USF2Q15853 346 aaPredicted RBP16.63■□□□□ 0.25
SMAD3-201ENST00000327367 CAB39LQ9H9S4 337 aa16.63■□□□□ 0.25
SMAD3-201ENST00000327367 RAPGEFL1Q9UHV5 662 aa16.63■□□□□ 0.25
SMAD3-201ENST00000327367 PLCL2Q9UPR0 1127 aa16.63■□□□□ 0.25
SMAD3-201ENST00000327367 PCDHA11Q9Y5I1 949 aa16.63■□□□□ 0.25
SMAD3-201ENST00000327367 A0A087X1B8 175 aa16.63■□□□□ 0.25
SMAD3-201ENST00000327367 CYB561D2O14569 222 aa16.63■□□□□ 0.25
SMAD3-201ENST00000327367 TGFBR2P37173 567 aa16.63■□□□□ 0.25
SMAD3-201ENST00000327367 DEFA5Q01523 94 aa16.63■□□□□ 0.25
SMAD3-201ENST00000327367 CNPY1Q3B7I2 92 aa16.63■□□□□ 0.25
SMAD3-201ENST00000327367 SLC30A10Q6XR72 485 aa16.63■□□□□ 0.25
SMAD3-201ENST00000327367 GPSM1Q86YR5 675 aa16.63■□□□□ 0.25
SMAD3-201ENST00000327367 PIH1D2Q8WWB5 315 aa16.63■□□□□ 0.25
SMAD3-201ENST00000327367 TOP1MTQ969P6 601 aa16.63■□□□□ 0.25
SMAD3-201ENST00000327367 ETNK2Q9NVF9 386 aa16.63■□□□□ 0.25
SMAD3-201ENST00000327367 ATP5BP06576 529 aaKnown RBP16.63■□□□□ 0.25
SMAD3-201ENST00000327367 SERPINA6P08185 405 aa16.63■□□□□ 0.25
SMAD3-201ENST00000327367 IFNGR2P38484 337 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms