RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 KDM1BQ8NB78 822 aa16.44■□□□□ 0.22
SRGAP2C-201ENST00000304465 CADM4Q8NFZ8 388 aa16.44■□□□□ 0.22
SRGAP2C-201ENST00000304465 GANCQ8TET4 914 aa16.44■□□□□ 0.22
SRGAP2C-201ENST00000304465 FAM172AQ8WUF8 416 aa16.44■□□□□ 0.22
SRGAP2C-201ENST00000304465 TBCBQ99426 244 aa16.44■□□□□ 0.22
SRGAP2C-201ENST00000304465 TKTL2Q9H0I9 626 aa16.44■□□□□ 0.22
SRGAP2C-201ENST00000304465 NCKAP1Q9Y2A7 1128 aa16.44■□□□□ 0.22
SRGAP2C-201ENST00000304465 HS3ST4Q9Y661 456 aa16.44■□□□□ 0.22
SRGAP2C-201ENST00000304465 C3orf70A6NLC5 250 aaPredicted RBP16.43■□□□□ 0.22
SRGAP2C-201ENST00000304465 ENGP17813 658 aa16.43■□□□□ 0.22
SRGAP2C-201ENST00000304465 MAPK8P45983 427 aa16.43■□□□□ 0.22
SRGAP2C-201ENST00000304465 CXCR3P49682 368 aa16.43■□□□□ 0.22
SRGAP2C-201ENST00000304465 CKAP4Q07065 602 aaKnown RBP16.43■□□□□ 0.22
SRGAP2C-201ENST00000304465 NAA30Q147X3 362 aaPredicted RBP16.43■□□□□ 0.22
SRGAP2C-201ENST00000304465 HNRNPA1L2Q32P51 320 aaKnown RBP16.43■□□□□ 0.22
SRGAP2C-201ENST00000304465 ACBD5Q5T8D3 534 aaPredicted RBP16.43■□□□□ 0.22
SRGAP2C-201ENST00000304465 APCDD1Q8J025 514 aa16.43■□□□□ 0.22
SRGAP2C-201ENST00000304465 NOA1Q8NC60 698 aaKnown RBP16.43■□□□□ 0.22
SRGAP2C-201ENST00000304465 SPATA4Q8NEY3 305 aa16.43■□□□□ 0.22
SRGAP2C-201ENST00000304465 EXD1Q8NHP7 514 aa16.43■□□□□ 0.22
SRGAP2C-201ENST00000304465 PGAP3Q96FM1 320 aaPredicted RBP16.43■□□□□ 0.22
SRGAP2C-201ENST00000304465 GTPBP2Q9BX10 602 aaKnown RBP16.43■□□□□ 0.22
SRGAP2C-201ENST00000304465 MIR1-1HGQ9H1L0 117 aa16.43■□□□□ 0.22
SRGAP2C-201ENST00000304465 PLXND1Q9Y4D7 1925 aa16.43■□□□□ 0.22
SRGAP2C-201ENST00000304465 DCHS1Q96JQ0 3298 aa16.43■□□□□ 0.22
SRGAP2C-201ENST00000304465 PGRMC1O00264 195 aaKnown RBP16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 CLDN11O75508 207 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 RNF8O76064 485 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 IGLV3-19P01714 112 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 SYPP08247 313 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 GGCXP38435 758 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 CTSOP43234 321 aaPredicted RBP16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 ARSEP51690 589 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 RPS14P62263 151 aaKnown RBP16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 SIX1Q15475 284 aaPredicted RBP16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 TAZQ16635 292 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 CDO1Q16878 200 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 STRADAQ7RTN6 431 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 SNX19Q92543 992 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 RAPGEF5Q92565 580 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 IGSF8Q969P0 613 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 BTBD1Q9H0C5 482 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 PCED1AQ9H1Q7 454 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 ARHGEF38Q9NXL2 777 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 PCSK1NQ9UHG2 260 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 SCML1Q9UN30 329 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 NUP205Q92621 2012 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 EDDM13A0A1B0GTR0 161 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 TCRBV7S2A1N4TA0A589 114 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 TARSL2A2RTX5 802 aaKnown RBP16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 CTAGE15A4D2H0 777 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 SIN3BO75182 1162 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 FGGP02679 453 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 CTAGE8P0CG41 777 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 RARAP10276 462 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 MAOBP27338 520 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 RDXP35241 583 aaKnown RBP16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 PAFAH1B1P43034 410 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 SSR1P43307 286 aaKnown RBP16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 CDH4P55283 916 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 CTAGE6Q86UF2 777 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 SLC13A5Q86YT5 568 aaPredicted RBP16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 CTAGE4Q8IX94 777 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 HDDC3Q8N4P3 179 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 MNS1Q8NEH6 495 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 RPL10LQ96L21 214 aaKnown RBP16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 MRGPRX3Q96LB0 322 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 MUC3BQ9H195 1237 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 RSPH9Q9H1X1 276 aaPredicted RBP16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 MTG2Q9H4K7 406 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 KLHL11Q9NVR0 708 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 SLC25A13Q9UJS0 675 aa16.42■□□□□ 0.22
SRGAP2C-201ENST00000304465 CACNA1AO00555 2505 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 METTL12A8MUP2 240 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 EFCAB8A8MWE9 144 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 TTC34A8MYJ7 566 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 CDX4O14627 284 aaPredicted RBP16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 TM4SF5O14894 197 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 ZRANB2O95218 330 aaKnown RBP eCLIP16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 KRT7P08729 469 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 MZF1P28698 734 aaPredicted RBP16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 GJC1P36383 396 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 NUMBP49757 651 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 PLK1P53350 603 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 C2orf54Q08AI8 447 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 HADHQ16836 314 aaKnown RBP16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 SMTNL2Q2TAL5 461 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 ACCSLQ4AC99 568 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 KCNT1Q5JUK3 1230 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 CCDC181Q5TID7 509 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 MFSD7Q6UXD7 560 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 RCOR2Q8IZ40 523 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 MYO19Q96H55 970 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 ZWILCHQ9H900 591 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 CAPN10Q9HC96 672 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 DDX56Q9NY93 547 aaKnown RBP16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 SLCO3A1Q9UIG8 710 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 VPS28Q9UK41 221 aa16.41■□□□□ 0.22
SRGAP2C-201ENST00000304465 A0A1B0GTW7 788 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms