RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 PRAMEF11O60813 436 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 CLDN11O75508 207 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 NEBLO76041 1014 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 OLFM2O95897 454 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 HLA-DQB2P05538 268 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 ADH1AP07327 375 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 CNPP09543 421 aaKnown RBP12.21□□□□□ -0.45
TPM3-202ENST00000302206 SLC6A4P31645 630 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 ADRA1AP35348 466 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 SEC24CP53992 1094 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 MGAT5Q09328 741 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 SLC14A2Q15849 920 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 ADGRF1Q5T601 910 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 TMCO4Q5TGY1 634 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 MARC1Q5VT66 337 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 CASC4Q6P4E1 433 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 TIFABQ6ZNK6 161 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 OTOP3Q7RTS5 596 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 TMEM150AQ86TG1 271 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 SPATS2Q86XZ4 545 aaKnown RBP12.21□□□□□ -0.45
TPM3-202ENST00000302206 CTAGE3PQ8IX95 158 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 BANPQ8N9N5 519 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 DNAAF3Q8N9W5 541 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 USP33Q8TEY7 942 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 AUTS2Q8WXX7 1259 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 TADA1Q96BN2 335 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 IMP4Q96G21 291 aaKnown RBP12.21□□□□□ -0.45
TPM3-202ENST00000302206 TBL1YQ9BQ87 522 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 ZBED2Q9BTP6 218 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 EMILIN2Q9BXX0 1053 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 PBX4Q9BYU1 374 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 SP110Q9HB58 689 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 IL21Q9HBE4 155 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 ARNT2Q9HBZ2 717 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 MRM3Q9HC36 420 aaKnown RBP12.21□□□□□ -0.45
TPM3-202ENST00000302206 SMYD2Q9NRG4 433 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 VPS45Q9NRW7 570 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 HAUS2Q9NVX0 235 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 MKS1Q9NXB0 559 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 CHD7Q9P2D1 2997 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 SOX13Q9UN79 622 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 RWDD3Q9Y3V2 267 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 FAM169AQ9Y6X4 670 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 SHROOM3Q8TF72 1996 aa12.21□□□□□ -0.46
TPM3-202ENST00000302206 REV3LO60673 3130 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 A0A1W2PPM1 405 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 ILVBLA1L0T0 632 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 ERICH4A6NGS2 130 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 CXorf49A8MYA2 514 aaPredicted RBP12.2□□□□□ -0.46
TPM3-202ENST00000302206 FOXO6A8MYZ6 492 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 H3BNC9 293 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 TGM5O43548 720 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 ASMTLO95671 621 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 CXCL14O95715 111 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 KLKB1P03952 638 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 KRT4P19013 534 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 DRD4P21917 467 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 OR1E1P30953 314 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 CORO1AP31146 461 aaKnown RBP12.2□□□□□ -0.46
TPM3-202ENST00000302206 ETFBP38117 255 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 CCNFP41002 786 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 IL9RQ01113 521 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 UBE3AQ05086 875 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 AAK1Q2M2I8 961 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 TRMT10BQ6PF06 316 aaKnown RBP12.2□□□□□ -0.46
TPM3-202ENST00000302206 POTEHQ6S545 545 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 KDELC1Q6UW63 502 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 ZNF783Q6ZMS7 281 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 RGS9BPQ6ZS82 235 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 SH2D5Q6ZV89 423 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 SETD3Q86TU7 594 aaPredicted RBP12.2□□□□□ -0.46
TPM3-202ENST00000302206 ANKRD42Q8N9B4 389 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 KLHL23Q8NBE8 558 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.2□□□□□ -0.46
TPM3-202ENST00000302206 DYDC1Q8WWB3 177 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 MRRFQ96E11 262 aaKnown RBP12.2□□□□□ -0.46
TPM3-202ENST00000302206 ZNF419Q96HQ0 510 aaPredicted RBP12.2□□□□□ -0.46
TPM3-202ENST00000302206 MAGEB18Q96M61 343 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 NECAB3Q96P71 396 aaPredicted RBP12.2□□□□□ -0.46
TPM3-202ENST00000302206 KLHL5Q96PQ7 755 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 KIFC1Q9BW19 673 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 RNF38Q9H0F5 515 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 NSRP1Q9H0G5 558 aaKnown RBP12.2□□□□□ -0.46
TPM3-202ENST00000302206 ZNF334Q9HCZ1 680 aaPredicted RBP12.2□□□□□ -0.46
TPM3-202ENST00000302206 SLC4A7Q9Y6M7 1214 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 PLXNA4Q9HCM2 1894 aa12.2□□□□□ -0.46
TPM3-202ENST00000302206 ANAPC1Q9H1A4 1944 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 A0A1B0GVM2 712 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 C2orf78A6NCI8 922 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 TCAF2A6NFQ2 919 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 J3KR12 359 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 LRG1P02750 347 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 CA4P22748 312 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 BMPR1AP36894 532 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 CRADDP78560 199 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 GNA12Q03113 381 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 RFTN1Q14699 578 aaPredicted RBP12.19□□□□□ -0.46
TPM3-202ENST00000302206 RAB30Q15771 203 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 ANKRD20A4Q4UJ75 823 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 PCID2Q5JVF3 399 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms