RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 HMGB3O15347 200 aaKnown RBP11.21□□□□□ -0.61
USP31-201ENST00000219689 H6PDO95479 791 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 THRBP10828 461 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 ITIH1P19827 911 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 RAB15P59190 212 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 EIF2S3LQ2VIR3 472 aaKnown RBP11.21□□□□□ -0.61
USP31-201ENST00000219689 TTC23Q5W5X9 447 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 NIM1KQ8IY84 436 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 C12orf50Q8NA57 414 aaPredicted RBP11.21□□□□□ -0.61
USP31-201ENST00000219689 TRIM62Q9BVG3 475 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 TIPINQ9BVW5 301 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 EPB41L4BQ9H329 900 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 AS3MTQ9HBK9 375 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 LYVE1Q9Y5Y7 322 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 M0R036 132 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 LINGO3P0C6S8 592 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 RCAN1P53805 252 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 SCN1BQ07699 218 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 ST3GAL1Q11201 340 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 PTPAQ15257 358 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.21□□□□□ -0.61
USP31-201ENST00000219689 PRPF19Q9UMS4 504 aaKnown RBP11.21□□□□□ -0.61
USP31-201ENST00000219689 ZDBF2Q9HCK1 2354 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 ORC5O43913 435 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 MAPK1P28482 360 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 CCNA1P78396 465 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 ENPEPQ07075 957 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 MTA1Q13330 715 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 TTC23LQ6PF05 361 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 PEG10Q86TG7 708 aaKnown RBP11.21□□□□□ -0.62
USP31-201ENST00000219689 SENP2Q9HC62 589 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 SHANK1Q9Y566 2161 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 GVINP1Q7Z2Y8 2422 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 KPNA3O00505 521 aaPredicted RBP11.21□□□□□ -0.62
USP31-201ENST00000219689 MDM4O15151 490 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 CST1P01037 141 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 RPL14P50914 215 aaKnown RBP11.21□□□□□ -0.62
USP31-201ENST00000219689 RPA4Q13156 261 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 AP3B2Q13367 1082 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 PDIA5Q14554 519 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 DCAF15Q66K64 600 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 SPESP1Q6UW49 350 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 PTCD3Q96EY7 689 aaKnown RBP11.21□□□□□ -0.62
USP31-201ENST00000219689 FAM20AQ96MK3 541 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 SCN3AQ9NY46 2000 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 TJP2Q9UDY2 1190 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 TM7SF2O76062 418 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 CRTAMO95727 393 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 PON2Q15165 354 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 KCNA10Q16322 511 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 DCAF6Q58WW2 860 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 HAUS6Q7Z4H7 955 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 ZNF467Q7Z7K2 595 aaPredicted RBP11.21□□□□□ -0.62
USP31-201ENST00000219689 CLYBLQ8N0X4 340 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 DCAF4Q8WV16 495 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 VMP1Q96GC9 406 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 CPNE1Q99829 537 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 XPNPEP3Q9NQH7 507 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 PI4KBQ9UBF8 816 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 GIT1Q9Y2X7 761 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 OVOS2A0A0G2JMS6 1433 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 HLA-DRAP01903 254 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 CCNB1P14635 433 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 RAP1GAPP47736 663 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 ANKRD26P1Q6NSI1 321 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 GATAD2BQ8WXI9 593 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 ZNF560Q96MR9 790 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 SLC25A23Q9BV35 468 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 IL25Q9H293 177 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 POLR3BQ9NW08 1133 aaPredicted RBP11.21□□□□□ -0.62
USP31-201ENST00000219689 STOX2Q9P2F5 926 aaPredicted RBP11.21□□□□□ -0.62
USP31-201ENST00000219689 ZNF232Q9UNY5 417 aa11.21□□□□□ -0.62
USP31-201ENST00000219689 PRKAR2AP13861 404 aaKnown RBP11.2□□□□□ -0.62
USP31-201ENST00000219689 MGAT5Q09328 741 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 PEX6Q13608 980 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 SPOCD1Q6ZMY3 1216 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 EIF1ADQ8N9N8 165 aaKnown RBP11.2□□□□□ -0.62
USP31-201ENST00000219689 SLC44A5Q8NCS7 719 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 ACOX2Q99424 681 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 FARSBQ9NSD9 589 aaKnown RBP11.2□□□□□ -0.62
USP31-201ENST00000219689 IFNA14P01570 189 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 PALB2Q86YC2 1186 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 C12orf43Q96C57 262 aaKnown RBP11.2□□□□□ -0.62
USP31-201ENST00000219689 SLITRK2Q9H156 845 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 TOPORSQ9NS56 1045 aaPredicted RBP11.2□□□□□ -0.62
USP31-201ENST00000219689 A0A0X1KG70 313 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 CLTBP09497 229 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 FDPSP14324 419 aaKnown RBP11.2□□□□□ -0.62
USP31-201ENST00000219689 SDC2P34741 201 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 RPL35P42766 123 aaKnown RBP11.2□□□□□ -0.62
USP31-201ENST00000219689 PGDP52209 483 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 PRKCQQ04759 706 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 BTBD16Q32M84 506 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 SPOCK2Q92563 424 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 SH2D3AQ9BRG2 576 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 ZNF350Q9GZX5 532 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 DNPEPQ9ULA0 475 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 MAP3K4Q9Y6R4 1608 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 RARBP10826 455 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 HNMTP50135 292 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms