RNA–Protein interactions for RNA: ENST00000637988.1

SCN1A-217, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-217ENST00000637988 ZNF717Q9BY31 904 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-217ENST00000637988 RASSF1Q9NS23 344 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 CKLFQ9UBR5 152 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 MFHAS1Q9Y4C4 1052 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 TIMM13Q9Y5L4 95 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-217ENST00000637988 ANKRD12Q6UB98 2062 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 INO80Q9ULG1 1556 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-217ENST00000637988 ERI2A8K979 691 aaKnown RBP6.22□□□□□ -1.41
SCN1A-217ENST00000637988 XKRYO14609 159 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 DTNBO60941 627 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 CYP17A1P05093 508 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 UCHL3P15374 230 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 PER3P56645 1201 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 ATG14Q6ZNE5 492 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 MILR1Q7Z6M3 343 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 FBXO39Q8N4B4 442 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 CDYL2Q8N8U2 506 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 ADCY4Q8NFM4 1077 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 IPCEF1Q8WWN9 437 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-217ENST00000637988 NUSAP1Q9BXS6 441 aaKnown RBP6.22□□□□□ -1.41
SCN1A-217ENST00000637988 GIT1Q9Y2X7 761 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 TCHHQ07283 1943 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 SETBP1Q9Y6X0 1596 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 ZBTB39O15060 712 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 SIN3BO75182 1162 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 CLEC3AO75596 197 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 PRLRP16471 622 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 EIF4BP23588 611 aaKnown RBP6.22□□□□□ -1.41
SCN1A-217ENST00000637988 TTPAP49638 278 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 GPM6BQ13491 265 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 PKN1Q16512 942 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 FGD3Q5JSP0 725 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 EOGTQ5NDL2 527 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 INTS11Q5TA45 600 aaKnown RBP6.22□□□□□ -1.41
SCN1A-217ENST00000637988 LPCAT2Q7L5N7 544 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 OXER1Q8TDS5 423 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 P2RX7Q99572 595 aaKnown RBP6.22□□□□□ -1.41
SCN1A-217ENST00000637988 USB1Q9BQ65 265 aaKnown RBP6.22□□□□□ -1.41
SCN1A-217ENST00000637988 POLLQ9UGP5 575 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 PCDHGC3Q9UN70 934 aa6.22□□□□□ -1.41
SCN1A-217ENST00000637988 FAM25AB3EWG3 89 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 FAM25CB3EWG5 89 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 FAM25GB3EWG6 89 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 SEC22BO75396 215 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 KRT75O95678 551 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 CXCL8P10145 99 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 KCNA5P22460 613 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 ACAT1P24752 427 aaKnown RBP6.21□□□□□ -1.41
SCN1A-217ENST00000637988 GABRR2P28476 465 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 SOX11P35716 441 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 ELK3P41970 407 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 PSMD4P55036 377 aaKnown RBP6.21□□□□□ -1.41
SCN1A-217ENST00000637988 CDH17Q12864 832 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 TRAF7Q6Q0C0 670 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.21□□□□□ -1.41
SCN1A-217ENST00000637988 NAT16Q8N8M0 369 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 TERB1Q8NA31 727 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 DCAKDQ8WVC6 231 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 FAM136AQ96C01 138 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 ITCHQ96J02 903 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 KCTD14Q9BQ13 255 aaPredicted RBP6.21□□□□□ -1.41
SCN1A-217ENST00000637988 TRIM9Q9C026 710 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 POPDC2Q9HBU9 364 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 INTS13Q9NVM9 706 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 A0A0B4J269 797 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 A0A1W2PQ67 120 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 A8MX80 341 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 SLC25A14O95258 325 aaPredicted RBP6.21□□□□□ -1.41
SCN1A-217ENST00000637988 JCHAINP01591 159 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 JMJD7P0C870 316 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 PRG2P13727 222 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 CYP2F1P24903 491 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 PPP4CP60510 307 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 BMPR2Q13873 1038 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 SGCBQ16585 318 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 Q4G0T1 1027 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 SEL1L3Q68CR1 1132 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 ACDQ96AP0 544 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 THAP11Q96EK4 314 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 SLC4A5Q9BY07 1137 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 GPR88Q9GZN0 384 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 MLXIPLQ9NP71 852 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 FBXO28Q9NVF7 368 aa6.21□□□□□ -1.41
SCN1A-217ENST00000637988 SPATA31E1Q6ZUB1 1445 aa6.21□□□□□ -1.42
SCN1A-217ENST00000637988 H0YGN5 161 aa6.21□□□□□ -1.42
SCN1A-217ENST00000637988 NTSR2O95665 410 aa6.21□□□□□ -1.42
SCN1A-217ENST00000637988 PCCBP05166 539 aa6.21□□□□□ -1.42
SCN1A-217ENST00000637988 HOXB8P17481 243 aaPredicted RBP6.21□□□□□ -1.42
SCN1A-217ENST00000637988 SREBF1P36956 1147 aa6.21□□□□□ -1.42
SCN1A-217ENST00000637988 CRYBB1P53674 252 aaPredicted RBP6.21□□□□□ -1.42
SCN1A-217ENST00000637988 ITGA1P56199 1179 aa6.21□□□□□ -1.42
SCN1A-217ENST00000637988 POU6F1Q14863 301 aa6.21□□□□□ -1.42
SCN1A-217ENST00000637988 LSM12Q3MHD2 195 aaKnown RBP6.21□□□□□ -1.42
SCN1A-217ENST00000637988 TIGD5Q53EQ6 642 aa6.21□□□□□ -1.42
SCN1A-217ENST00000637988 AP1ARQ63HQ0 302 aa6.21□□□□□ -1.42
SCN1A-217ENST00000637988 GAD1Q99259 594 aa6.21□□□□□ -1.42
SCN1A-217ENST00000637988 CCDC154A6NI56 674 aa6.21□□□□□ -1.42
SCN1A-217ENST00000637988 OR6C75A6NL08 312 aa6.21□□□□□ -1.42
SCN1A-217ENST00000637988 SCN2BO60939 215 aa6.21□□□□□ -1.42
SCN1A-217ENST00000637988 RECQL4O94761 1208 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms