RNA–Protein interactions for RNA: ENST00000620759.1

CDKN3-212, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-212ENST00000620759 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
CDKN3-212ENST00000620759 ZDHHC23Q8IYP9 409 aa3.23□□□□□ -1.89
CDKN3-212ENST00000620759 FAM110DQ8TAY7 271 aaPredicted RBP3.23□□□□□ -1.89
CDKN3-212ENST00000620759 TXNDC15Q96J42 360 aa3.23□□□□□ -1.89
CDKN3-212ENST00000620759 MALT1Q9UDY8 824 aa3.23□□□□□ -1.89
CDKN3-212ENST00000620759 SLC25A13Q9UJS0 675 aa3.23□□□□□ -1.89
CDKN3-212ENST00000620759 TCRBV7S3A2A0A539 114 aa3.22□□□□□ -1.89
CDKN3-212ENST00000620759 MBD3L5A6NJ08 208 aaPredicted RBP3.22□□□□□ -1.89
CDKN3-212ENST00000620759 HNRNPDLO14979 420 aaKnown RBP3.22□□□□□ -1.89
CDKN3-212ENST00000620759 RNMTO43148 476 aaKnown RBP3.22□□□□□ -1.89
CDKN3-212ENST00000620759 PEPDP12955 493 aa3.22□□□□□ -1.89
CDKN3-212ENST00000620759 PRKCHP24723 683 aa3.22□□□□□ -1.89
CDKN3-212ENST00000620759 GLIPR1P48060 266 aa3.22□□□□□ -1.89
CDKN3-212ENST00000620759 CLCNKBP51801 687 aa3.22□□□□□ -1.89
CDKN3-212ENST00000620759 ZBTB16Q05516 673 aa3.22□□□□□ -1.89
CDKN3-212ENST00000620759 RNASELQ05823 741 aaKnown RBP3.22□□□□□ -1.89
CDKN3-212ENST00000620759 RINT1Q6NUQ1 792 aa3.22□□□□□ -1.89
CDKN3-212ENST00000620759 NRSN1Q8IZ57 195 aa3.22□□□□□ -1.89
CDKN3-212ENST00000620759 ANKRD44Q8N8A2 993 aa3.22□□□□□ -1.89
CDKN3-212ENST00000620759 JDP2Q8WYK2 163 aa3.22□□□□□ -1.89
CDKN3-212ENST00000620759 BICD1Q96G01 975 aa3.22□□□□□ -1.89
CDKN3-212ENST00000620759 IFT27Q9BW83 186 aa3.22□□□□□ -1.89
CDKN3-212ENST00000620759 SEL1LQ9UBV2 794 aa3.22□□□□□ -1.89
CDKN3-212ENST00000620759 CDH22Q9UJ99 828 aa3.22□□□□□ -1.89
CDKN3-212ENST00000620759 NFS1Q9Y697 457 aa3.22□□□□□ -1.89
CDKN3-212ENST00000620759 DOCK7Q96N67 2140 aa3.22□□□□□ -1.89
CDKN3-212ENST00000620759 HSPB6O14558 160 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 PCDH17O14917 1159 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 KIF1CO43896 1103 aaKnown RBP3.21□□□□□ -1.9
CDKN3-212ENST00000620759 RPP40O75818 363 aaKnown RBP3.21□□□□□ -1.9
CDKN3-212ENST00000620759 LARGE1O95461 756 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 RFC1P35251 1148 aaPredicted RBP3.21□□□□□ -1.9
CDKN3-212ENST00000620759 PRIM2P49643 509 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 CRIP2P52943 208 aaPredicted RBP3.21□□□□□ -1.9
CDKN3-212ENST00000620759 TROAPQ12815 778 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 MYBPHQ13203 477 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 PLEKHG6Q3KR16 790 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 ZACNQ401N2 412 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 NCAPH2Q6IBW4 605 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 C9orf139Q6ZV77 190 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 NEK10Q6ZWH5 1172 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 ZNF771Q7L3S4 317 aaPredicted RBP3.21□□□□□ -1.9
CDKN3-212ENST00000620759 PATL1Q86TB9 770 aaKnown RBP3.21□□□□□ -1.9
CDKN3-212ENST00000620759 SPEM1Q8N4L4 309 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 CTCFLQ8NI51 663 aaPredicted RBP3.21□□□□□ -1.9
CDKN3-212ENST00000620759 CLEC4CQ8WTT0 213 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 BRI3BPQ8WY22 251 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 ZNF566Q969W8 418 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 DUX3Q96PT4 197 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 FRG2BQ96QU4 278 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 GAREM1Q9H706 876 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 DDX21Q9NR30 783 aaKnown RBP eCLIP3.21□□□□□ -1.9
CDKN3-212ENST00000620759 TM7SF3Q9NS93 570 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 CEP83Q9Y592 693 aa3.21□□□□□ -1.9
CDKN3-212ENST00000620759 A0A0U1RQJ8 604 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 LDLRP01130 860 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 HARSP12081 509 aaKnown RBP3.2□□□□□ -1.9
CDKN3-212ENST00000620759 DGKAP23743 735 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 GSTM2P28161 218 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 AKT1P31749 480 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 FAM3BP58499 235 aaPredicted RBP3.2□□□□□ -1.9
CDKN3-212ENST00000620759 ARL16Q0P5N6 197 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 DMP1Q13316 513 aaPredicted RBP3.2□□□□□ -1.9
CDKN3-212ENST00000620759 HDAC1Q13547 482 aaPredicted RBP3.2□□□□□ -1.9
CDKN3-212ENST00000620759 PMS2P11Q13670 270 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 TYW3Q6IPR3 259 aaKnown RBP3.2□□□□□ -1.9
CDKN3-212ENST00000620759 PLEKHA7Q6IQ23 1121 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 HIBCHQ6NVY1 386 aaPredicted RBP3.2□□□□□ -1.9
CDKN3-212ENST00000620759 GDPD4Q6W3E5 623 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 TRMT1LQ7Z2T5 733 aaKnown RBP3.2□□□□□ -1.9
CDKN3-212ENST00000620759 TEX45Q8NA69 505 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 SPATA20Q8TB22 786 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 HDAC7Q8WUI4 952 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 SECTM1Q8WVN6 248 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 FAR1Q8WVX9 515 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 TAF15Q92804 592 aaKnown RBP eCLIP3.2□□□□□ -1.9
CDKN3-212ENST00000620759 CD101Q93033 1021 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 FEM1CQ96JP0 617 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 NPAS1Q99742 590 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 Q9N2J8 555 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 SLC45A1Q9Y2W3 748 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 PCDHAC2Q9Y5I4 1007 aa3.2□□□□□ -1.9
CDKN3-212ENST00000620759 CKAP5Q14008 2032 aa3.19□□□□□ -1.9
CDKN3-212ENST00000620759 A0A1B0GVM2 712 aa3.19□□□□□ -1.9
CDKN3-212ENST00000620759 FAM172BPA6NC97 362 aa3.19□□□□□ -1.9
CDKN3-212ENST00000620759 KDM4EB2RXH2 506 aaPredicted RBP3.19□□□□□ -1.9
CDKN3-212ENST00000620759 KIF28PB7ZC32 967 aa3.19□□□□□ -1.9
CDKN3-212ENST00000620759 PRAC2D3DTV9 90 aa3.19□□□□□ -1.9
CDKN3-212ENST00000620759 CLDN7O95471 211 aa3.19□□□□□ -1.9
CDKN3-212ENST00000620759 PAK4O96013 591 aaPredicted RBP3.19□□□□□ -1.9
CDKN3-212ENST00000620759 RNF224P0DH78 156 aa3.19□□□□□ -1.9
CDKN3-212ENST00000620759 EEF1GP26641 437 aaKnown RBP3.19□□□□□ -1.9
CDKN3-212ENST00000620759 PCP4P48539 62 aa3.19□□□□□ -1.9
CDKN3-212ENST00000620759 MXI1P50539 228 aa3.19□□□□□ -1.9
CDKN3-212ENST00000620759 RCAN1P53805 252 aa3.19□□□□□ -1.9
CDKN3-212ENST00000620759 ERVK11-1P61568 191 aa3.19□□□□□ -1.9
CDKN3-212ENST00000620759 PHEXP78562 749 aa3.19□□□□□ -1.9
CDKN3-212ENST00000620759 SF3A3Q12874 501 aaKnown RBP eCLIP3.19□□□□□ -1.9
CDKN3-212ENST00000620759 PKP1Q13835 747 aa3.19□□□□□ -1.9
CDKN3-212ENST00000620759 RAB30Q15771 203 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms