RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 TBCBQ99426 244 aa21.29■■□□□ 1
TRAPPC3-208ENST00000616074 C2orf49Q9BVC5 232 aaPredicted RBP21.29■■□□□ 1
TRAPPC3-208ENST00000616074 NDST4Q9H3R1 872 aa21.29■■□□□ 1
TRAPPC3-208ENST00000616074 PREBQ9HCU5 417 aa21.29■■□□□ 1
TRAPPC3-208ENST00000616074 KNTC1P50748 2209 aa21.29■■□□□ 1
TRAPPC3-208ENST00000616074 A0A0D9SEW6 157 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 E9PAM4 449 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 PRAMEF26H0Y7S4 382 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 RNF103O00237 685 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 SMAD6O43541 496 aaKnown RBP21.28■■□□□ 1
TRAPPC3-208ENST00000616074 MAGEC1O60732 1142 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 RNGTTO60942 597 aaKnown RBP21.28■■□□□ 1
TRAPPC3-208ENST00000616074 SDC3O75056 442 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 CDK4P11802 303 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 PRKCSHP14314 528 aaPredicted RBP21.28■■□□□ 1
TRAPPC3-208ENST00000616074 JUPP14923 745 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 CYP11B1P15538 503 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 RRM1P23921 792 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 CHRNA3P32297 505 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 HNF1BP35680 557 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 GABRB2P47870 512 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 BPIFB4P59827 614 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 DEUP1Q05D60 604 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 RAPGEF1Q13905 1077 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 DRAP1Q14919 205 aaPredicted RBP21.28■■□□□ 1
TRAPPC3-208ENST00000616074 VWA3BQ502W6 1294 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 HSP90AA4PQ58FG1 418 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 FAM102AQ5T9C2 384 aaPredicted RBP21.28■■□□□ 1
TRAPPC3-208ENST00000616074 TFAP2DQ7Z6R9 452 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 ARRDC3Q96B67 414 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 PDCL3Q9H2J4 239 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 MPP6Q9NZW5 540 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 FHOD1Q9Y613 1164 aa21.28■■□□□ 1
TRAPPC3-208ENST00000616074 DRGXA6NNA5 263 aa21.27■■□□□ 1
TRAPPC3-208ENST00000616074 KPNA3O00505 521 aaPredicted RBP21.27■■□□□ 1
TRAPPC3-208ENST00000616074 KCNMA1Q12791 1236 aa21.27■■□□□ 1
TRAPPC3-208ENST00000616074 SLC25A52Q3SY17 297 aa21.27■■□□□ 1
TRAPPC3-208ENST00000616074 C2CD6Q53TS8 623 aa21.27■■□□□ 1
TRAPPC3-208ENST00000616074 HES3Q5TGS1 186 aa21.27■■□□□ 1
TRAPPC3-208ENST00000616074 LINGO4Q6UY18 593 aa21.27■■□□□ 1
TRAPPC3-208ENST00000616074 SETD3Q86TU7 594 aaPredicted RBP21.27■■□□□ 1
TRAPPC3-208ENST00000616074 XYLT1Q86Y38 959 aa21.27■■□□□ 1
TRAPPC3-208ENST00000616074 FAM114A1Q8IWE2 563 aa21.27■■□□□ 1
TRAPPC3-208ENST00000616074 DCAF4L2Q8NA75 395 aa21.27■■□□□ 1
TRAPPC3-208ENST00000616074 TMEM145Q8NBT3 493 aa21.27■■□□□ 1
TRAPPC3-208ENST00000616074 CHST14Q8NCH0 376 aa21.27■■□□□ 1
TRAPPC3-208ENST00000616074 KLK6Q92876 244 aa21.27■■□□□ 1
TRAPPC3-208ENST00000616074 C18orf8Q96DM3 657 aa21.27■■□□□ 1
TRAPPC3-208ENST00000616074 LRIG1Q96JA1 1093 aa21.27■■□□□ 1
TRAPPC3-208ENST00000616074 CCDC114Q96M63 670 aa21.27■■□□□ 1
TRAPPC3-208ENST00000616074 MYOCQ99972 504 aa21.27■■□□□ 1
TRAPPC3-208ENST00000616074 TUBGCP2Q9BSJ2 902 aa21.27■■□□□ 1
TRAPPC3-208ENST00000616074 FARP1Q9Y4F1 1045 aaPredicted RBP21.27■■□□□ 1
TRAPPC3-208ENST00000616074 A0A1W2PQU0 124 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 SLC31A1O15431 190 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 F9P00740 461 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 PRLRP16471 622 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 GLDCP23378 1020 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 FLT3P36888 993 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 SCNN1AP37088 669 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 DPCR1Q3MIW9 517 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 SOWAHCQ53LP3 525 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 ARTNQ5T4W7 220 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 C6orf118Q5T5N4 469 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 TAF3Q5VWG9 929 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 TRNP1Q6NT89 227 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 C22orf39Q6P5X5 142 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 FBXL19Q6PCT2 694 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 LRRC31Q6UY01 552 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 TMIEQ8NEW7 156 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 NXPE2Q96DL1 559 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 KLHDC7BQ96G42 594 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 C1orf74Q96LT6 269 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 PAXBP1Q9Y5B6 917 aa21.26■□□□□ 0.99
TRAPPC3-208ENST00000616074 IGLV3-10A0A075B6K4 115 aa21.25■□□□□ 0.99
TRAPPC3-208ENST00000616074 A0A087WV48 116 aa21.25■□□□□ 0.99
TRAPPC3-208ENST00000616074 THEGLP0DJG4 465 aa21.25■□□□□ 0.99
TRAPPC3-208ENST00000616074 CKMT2P17540 419 aa21.25■□□□□ 0.99
TRAPPC3-208ENST00000616074 CLCN6P51797 869 aa21.25■□□□□ 0.99
TRAPPC3-208ENST00000616074 TARDBPQ13148 414 aaKnown RBP eCLIP21.25■□□□□ 0.99
TRAPPC3-208ENST00000616074 KLHDC7AQ5VTJ3 777 aa21.25■□□□□ 0.99
TRAPPC3-208ENST00000616074 ERICH1Q86X53 443 aa21.25■□□□□ 0.99
TRAPPC3-208ENST00000616074 OR7D4Q8NG98 312 aa21.25■□□□□ 0.99
TRAPPC3-208ENST00000616074 GRIN3AQ8TCU5 1115 aa21.25■□□□□ 0.99
TRAPPC3-208ENST00000616074 TNKS2Q9H2K2 1166 aa21.25■□□□□ 0.99
TRAPPC3-208ENST00000616074 FZD3Q9NPG1 666 aa21.25■□□□□ 0.99
TRAPPC3-208ENST00000616074 FASNP49327 2511 aaKnown RBP21.25■□□□□ 0.99
TRAPPC3-208ENST00000616074 TDRD6O60522 2096 aaKnown RBP21.25■□□□□ 0.99
TRAPPC3-208ENST00000616074 GOLGA8SH3BPF8 625 aa21.24■□□□□ 0.99
TRAPPC3-208ENST00000616074 SRGAP2O75044 1071 aa21.24■□□□□ 0.99
TRAPPC3-208ENST00000616074 PRNPP04156 253 aa21.24■□□□□ 0.99
TRAPPC3-208ENST00000616074 OR1E1P30953 314 aa21.24■□□□□ 0.99
TRAPPC3-208ENST00000616074 ILKQ13418 452 aa21.24■□□□□ 0.99
TRAPPC3-208ENST00000616074 ACAP1Q15027 740 aa21.24■□□□□ 0.99
TRAPPC3-208ENST00000616074 ZNF284Q2VY69 593 aa21.24■□□□□ 0.99
TRAPPC3-208ENST00000616074 PROX2Q3B8N5 592 aa21.24■□□□□ 0.99
TRAPPC3-208ENST00000616074 NEK5Q6P3R8 708 aa21.24■□□□□ 0.99
TRAPPC3-208ENST00000616074 BNIPLQ7Z465 357 aa21.24■□□□□ 0.99
TRAPPC3-208ENST00000616074 NOP9Q86U38 636 aaKnown RBP21.24■□□□□ 0.99
TRAPPC3-208ENST00000616074 HORMAD1Q86X24 394 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms