RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 KCNMA1Q12791 1236 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 DLG2Q15700 870 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 ACCSLQ4AC99 568 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 FAM46CQ5VWP2 391 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 FBXL22Q6P050 247 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 Q6ZVU0 165 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 TMC6Q7Z403 805 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 LUZP1Q86V48 1076 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 IRF2BP1Q8IU81 584 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 TRIM59Q8IWR1 403 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 OR8D1Q8WZ84 308 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 NOX5Q96PH1 765 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 LGMNQ99538 433 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 MYOCQ99972 504 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 FEM1AQ9BSK4 669 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 U3KQA8 63 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 BOD1L1Q8NFC6 3051 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 ERVH48-1M5A8F1 160 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 PES1O00541 588 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 FFAR2O15552 330 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 SART1O43290 800 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 RNGTTO60942 597 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 MT-CO1P00395 513 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 AFPP02771 609 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 CTSLP07711 333 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 CKMT1AP12532 417 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 PRKCSHP14314 528 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 YWHAZP63104 245 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 DAB2P98082 770 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 CENPCQ03188 943 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 CETN1Q12798 172 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 NCAPHQ15003 741 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 IQCB1Q15051 598 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 ZNF284Q2VY69 593 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 SETMARQ53H47 684 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 TCP11X2Q5H9J9 407 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 PIP5KL1Q5T9C9 394 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 ARHGAP40Q5TG30 622 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 CDKAL1Q5VV42 579 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 DSG4Q86SJ6 1040 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 TMEM110Q86TL2 294 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 ZNF248Q8NDW4 579 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 OR13H1Q8NG92 308 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 ZNF578Q96N58 590 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 TUBGCP2Q9BSJ2 902 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 POPDC2Q9HBU9 364 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 PREBQ9HCU5 417 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 FZD3Q9NPG1 666 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 CNTN6Q9UQ52 1028 aa16.89■□□□□ 0.29
SHKBP1-215ENST00000597649 A0A1W2PQU0 124 aa16.88■□□□□ 0.29
SHKBP1-215ENST00000597649 TCAF2A6NFQ2 919 aa16.88■□□□□ 0.29
SHKBP1-215ENST00000597649 E5RJQ4 531 aa16.88■□□□□ 0.29
SHKBP1-215ENST00000597649 J3QKU1 62 aa16.88■□□□□ 0.29
SHKBP1-215ENST00000597649 PIAS2O75928 621 aa16.88■□□□□ 0.29
SHKBP1-215ENST00000597649 ACADSBP45954 432 aa16.88■□□□□ 0.29
SHKBP1-215ENST00000597649 CLDN2P57739 230 aa16.88■□□□□ 0.29
SHKBP1-215ENST00000597649 MAN2A1Q16706 1144 aa16.88■□□□□ 0.29
SHKBP1-215ENST00000597649 C14orf80Q86SX3 495 aa16.88■□□□□ 0.29
SHKBP1-215ENST00000597649 ATP6V0D2Q8N8Y2 350 aa16.88■□□□□ 0.29
SHKBP1-215ENST00000597649 EHBP1Q8NDI1 1231 aa16.88■□□□□ 0.29
SHKBP1-215ENST00000597649 STK32AQ8WU08 396 aa16.88■□□□□ 0.29
SHKBP1-215ENST00000597649 OSBPL2Q9H1P3 480 aa16.88■□□□□ 0.29
SHKBP1-215ENST00000597649 ACP6Q9NPH0 428 aa16.88■□□□□ 0.29
SHKBP1-215ENST00000597649 ZFR2Q9UPR6 939 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-215ENST00000597649 TDRD6O60522 2096 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-215ENST00000597649 COL12A1Q99715 3063 aa16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 NYNRINQ9P2P1 1898 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 A0A1W2PNU3 283 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 BNIP3LO60238 219 aa16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 USP12O75317 370 aa16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 DXOO77932 396 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 ZNF18P17022 549 aa16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 LSSP48449 732 aa16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 PCBP4P57723 403 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 GABREP78334 506 aa16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 AUHQ13825 339 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 TAF1BQ53T94 588 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 ZNF542PQ5EBM4 170 aa16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 SLC22A18ASQ8N1D0 253 aa16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 SH2D3CQ8N5H7 860 aa16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 RNF214Q8ND24 703 aa16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 ARRDC3Q96B67 414 aa16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 APOLD1Q96LR9 279 aa16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 ASCL3Q9NQ33 180 aa16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 TAB2Q9NYJ8 693 aa16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 SLC12A6Q9UHW9 1150 aa16.87■□□□□ 0.29
SHKBP1-215ENST00000597649 BSNQ9UPA5 3926 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 SYNJ2BP-COX16A0A087WUM0 186 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 C1QTNF3-AMACRE9PGA6 284 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 K7ERQ8 282 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 ALOX15BO15296 676 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 CSO75390 466 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 SRCP12931 536 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 GGCXP38435 758 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 GCNT1Q02742 428 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 KRT31Q15323 416 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 VWA3BQ502W6 1294 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 RABGAP1LQ5R372 815 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 TTC39BQ5VTQ0 682 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms