RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	KLHL10	Q6JEL2	608 aa		18.75	■□□□□ 0.59
CIRBP-238	ENST00000592412	GJB7	Q6PEY0	223 aa		18.75	■□□□□ 0.59
CIRBP-238	ENST00000592412	GCNT7	Q6ZNI0	430 aa		18.75	■□□□□ 0.59
CIRBP-238	ENST00000592412	TMC6	Q7Z403	805 aa		18.75	■□□□□ 0.59
CIRBP-238	ENST00000592412	OR2A12	Q8NGT7	310 aa		18.75	■□□□□ 0.59
CIRBP-238	ENST00000592412	GTPBP4	Q9BZE4	634 aa	Known RBP	18.75	■□□□□ 0.59
CIRBP-238	ENST00000592412	UBE2T	Q9NPD8	197 aa	Predicted RBP	18.75	■□□□□ 0.59
CIRBP-238	ENST00000592412	ANLN	Q9NQW6	1124 aa		18.75	■□□□□ 0.59
CIRBP-238	ENST00000592412	MYO18B	Q8IUG5	2567 aa		18.75	■□□□□ 0.59
CIRBP-238	ENST00000592412	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	18.74	■□□□□ 0.59
CIRBP-238	ENST00000592412	MED7	O43513	233 aa		18.74	■□□□□ 0.59
CIRBP-238	ENST00000592412	SMAD6	O43541	496 aa	Known RBP	18.74	■□□□□ 0.59
CIRBP-238	ENST00000592412	CNTN5	O94779	1100 aa		18.74	■□□□□ 0.59
CIRBP-238	ENST00000592412	MPO	P05164	745 aa		18.74	■□□□□ 0.59
CIRBP-238	ENST00000592412	GLI1	P08151	1106 aa		18.74	■□□□□ 0.59
CIRBP-238	ENST00000592412	ZNF18	P17022	549 aa		18.74	■□□□□ 0.59
CIRBP-238	ENST00000592412	CLDN2	P57739	230 aa		18.74	■□□□□ 0.59
CIRBP-238	ENST00000592412	ZNF177	Q13360	481 aa	Predicted RBP	18.74	■□□□□ 0.59
CIRBP-238	ENST00000592412	STIM1	Q13586	685 aa		18.74	■□□□□ 0.59
CIRBP-238	ENST00000592412	ARTN	Q5T4W7	220 aa		18.74	■□□□□ 0.59
CIRBP-238	ENST00000592412	FOXR2	Q6PJQ5	311 aa		18.74	■□□□□ 0.59
CIRBP-238	ENST00000592412	HORMAD1	Q86X24	394 aa		18.74	■□□□□ 0.59
CIRBP-238	ENST00000592412	ZNF683	Q8IZ20	524 aa		18.74	■□□□□ 0.59
CIRBP-238	ENST00000592412	CHST14	Q8NCH0	376 aa		18.74	■□□□□ 0.59
CIRBP-238	ENST00000592412	NELFB	Q8WX92	580 aa		18.74	■□□□□ 0.59
CIRBP-238	ENST00000592412	NAF1	Q96HR8	494 aa	Known RBP	18.74	■□□□□ 0.59
CIRBP-238	ENST00000592412	GPR27	Q9NS67	375 aa		18.74	■□□□□ 0.59
CIRBP-238	ENST00000592412	ASNSD1	Q9NWL6	643 aa		18.74	■□□□□ 0.59
CIRBP-238	ENST00000592412	TDRD6	O60522	2096 aa	Known RBP	18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	BOD1L1	Q8NFC6	3051 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	PAGE1	O75459	146 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	CLDN11	O75508	207 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	AFP	P02771	609 aa	Known RBP	18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	RRM1	P23921	792 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	CHRNA3	P32297	505 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	APBA1	Q02410	837 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	TMEM259	Q4ZIN3	620 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	ALF	Q53S48	1182 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	SEL1L3	Q68CR1	1132 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	NEK5	Q6P3R8	708 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	OLFML1	Q6UWY5	402 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	FAM183BP	Q6ZVS7	135 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	ABI3BP	Q7Z7G0	1075 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	ZNF248	Q8NDW4	579 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	RNF34	Q969K3	372 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	APOLD1	Q96LR9	279 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	TIGD1	Q96MW7	591 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	LGMN	Q99538	433 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	CALN1	Q9BXU9	219 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412	VPS51	Q9UID3	782 aa		18.73	■□□□□ 0.59
CIRBP-238	ENST00000592412		A0A1W2PNU3	283 aa	Predicted RBP	18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	KPNA3	O00505	521 aa	Predicted RBP	18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	HSF2BP	O75031	334 aa		18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	DXO	O77932	396 aa	Known RBP	18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	TFE3	P19532	575 aa	Predicted RBP	18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	HNRNPA2B1	P22626	353 aa	Known RBP	18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	CDH4	P55283	916 aa		18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	PCBP4	P57723	403 aa	Known RBP	18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	GABRE	P78334	506 aa		18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	CFHR1	Q03591	330 aa		18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	NME3	Q13232	169 aa		18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	ZNF542P	Q5EBM4	170 aa		18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	ZNF605	Q86T29	641 aa		18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	PASD1	Q8IV76	773 aa		18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	TMIE	Q8NEW7	156 aa		18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	COL26A1	Q96A83	441 aa		18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	PPP1R13B	Q96KQ4	1090 aa		18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	ZNF578	Q96N58	590 aa	Predicted RBP	18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	PPP1R9B	Q96SB3	815 aa		18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	MUC3B	Q9H195	1237 aa		18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	CPNE5	Q9HCH3	593 aa		18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	ASCL3	Q9NQ33	180 aa		18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	PIGV	Q9NUD9	493 aa		18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	NLGN3	Q9NZ94	848 aa		18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	CTNND2	Q9UQB3	1225 aa		18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	SNX10	Q9Y5X0	201 aa		18.72	■□□□□ 0.59
CIRBP-238	ENST00000592412	COL6A6	A6NMZ7	2263 aa		18.71	■□□□□ 0.59
CIRBP-238	ENST00000592412	ERVH48-1	M5A8F1	160 aa		18.71	■□□□□ 0.59
CIRBP-238	ENST00000592412	USP12	O75317	370 aa		18.71	■□□□□ 0.59
CIRBP-238	ENST00000592412	ZNF821	O75541	412 aa	Predicted RBP	18.71	■□□□□ 0.59
CIRBP-238	ENST00000592412	NEBL	O76041	1014 aa		18.71	■□□□□ 0.59
CIRBP-238	ENST00000592412	ADCY5	O95622	1261 aa		18.71	■□□□□ 0.59
CIRBP-238	ENST00000592412	ERBB2	P04626	1255 aa		18.71	■□□□□ 0.59
CIRBP-238	ENST00000592412	AKT2	P31751	481 aa		18.71	■□□□□ 0.59
CIRBP-238	ENST00000592412	STX17	P56962	302 aa		18.71	■□□□□ 0.59
CIRBP-238	ENST00000592412	FGL2	Q14314	439 aa		18.71	■□□□□ 0.59
CIRBP-238	ENST00000592412	EFHC1	Q5JVL4	640 aa		18.71	■□□□□ 0.59
CIRBP-238	ENST00000592412	LINGO4	Q6UY18	593 aa		18.71	■□□□□ 0.59
CIRBP-238	ENST00000592412	ATP11C	Q8NB49	1132 aa		18.71	■□□□□ 0.59
CIRBP-238	ENST00000592412	BMF	Q96LC9	184 aa		18.71	■□□□□ 0.59
CIRBP-238	ENST00000592412	CRACR2A	Q9BSW2	395 aa		18.71	■□□□□ 0.59
CIRBP-238	ENST00000592412	SIK2	Q9H0K1	926 aa		18.71	■□□□□ 0.59
CIRBP-238	ENST00000592412		A0A0D9SEW6	157 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412		K7ESM1	405 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	SCAMP1	O15126	338 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	LZTS3	O60299	673 aa	Predicted RBP	18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	CS	O75390	466 aa	Known RBP	18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	DAB1	O75553	588 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	GP1BA	P07359	652 aa		18.7	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms