RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 CCINQ13939 588 aa17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 RFTN1Q14699 578 aaPredicted RBP17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 OASLQ15646 514 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 METTL3Q86U44 580 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 SFTPA1Q8IWL2 248 aa17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 ZNF687Q8N1G0 1237 aa17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 CCNYQ8ND76 341 aa17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 KCNV2Q8TDN2 545 aa17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 MAML1Q92585 1016 aa17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 FAM118BQ9BPY3 351 aa17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 AP1M1Q9BXS5 423 aa17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 SLC25A13Q9UJS0 675 aa17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 DNPEPQ9ULA0 475 aa17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 MRPS17Q9Y2R5 130 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 H7C0C1 242 aa17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 NPC1O15118 1278 aa17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 MATN3O15232 486 aa17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 CD160O95971 181 aa17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 EGFP01133 1207 aa17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 CHRM1P11229 460 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 CTSOP43234 321 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 ATP5OP48047 213 aa17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 NUMBP49757 651 aa17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 CLCN6P51797 869 aa17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 AP1B1Q10567 949 aa17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 BYSLQ13895 437 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 HNRNPDQ14103 355 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 PTPRNQ16849 979 aa17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 FBXO43Q4G163 708 aa17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 INO80DQ53TQ3 878 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 TMCO4Q5TGY1 634 aa17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 SIX5Q8N196 739 aa17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 MRGPRX3Q96LB0 322 aa17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 UBA2Q9UBT2 640 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 ERVW-1Q9UQF0 538 aa17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 NCOR1O75376 2440 aa17.3■□□□□ 0.36
PRKCSH-203ENST00000586486 CFAP69A5D8W1 941 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 CCDC188H7C350 402 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 DCXO43602 365 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 ITGAVP06756 1048 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 HNRNPLP14866 589 aaKnown RBP eCLIP17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 VAV1P15498 845 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 KIR2DL1P43626 348 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 IFI35P80217 286 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 SIGLEC14Q08ET2 396 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 LINGO4Q6UY18 593 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 SH2D3CQ8N5H7 860 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 CCDC26Q8TAB7 109 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 NSMCE1Q8WV22 266 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 SORCS1Q8WY21 1168 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 EDAQ92838 391 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 MYO19Q96H55 970 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 NELL2Q99435 816 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 LTB4R2Q9NPC1 389 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 THAP10Q9P2Z0 257 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 HCN2Q9UL51 889 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 KANSL1LA0AUZ9 987 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 PHF2O75151 1096 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 SRCP12931 536 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 CD72P21854 359 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 STK19P49842 368 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 ENPP2Q13822 863 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 DNTTIP2Q5QJE6 756 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 HEATR6Q6AI08 1181 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 DARS2Q6PI48 645 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 TEX26Q8N6G2 289 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 CYB5D2Q8WUJ1 264 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 HTR3CQ8WXA8 447 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 FERMT1Q9BQL6 677 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 CEP44Q9C0F1 390 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 AMACRQ9UHK6 382 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 PLA2G4CQ9UP65 541 aa17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 DRG1Q9Y295 367 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-203ENST00000586486 TRIOO75962 3097 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 ATP9BO43861 1147 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 MT-CO1P00395 513 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 CCNB1P14635 433 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 RBL1P28749 1068 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 CHRNA3P32297 505 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 FNTAP49354 379 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 RENBPP51606 427 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 LBRQ14739 615 aaKnown RBP17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 DGKKQ5KSL6 1271 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 EGFLAMQ63HQ2 1017 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 SYNPOQ8N3V7 929 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 ZNF513Q8N8E2 541 aaPredicted RBP17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 SPATA4Q8NEY3 305 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 LRRN4Q8WUT4 740 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 MAGOHBQ96A72 148 aaKnown RBP17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 RTP4Q96DX8 246 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 RPL10LQ96L21 214 aaKnown RBP17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 VAT1Q99536 393 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 IL12RB2Q99665 862 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 OSBPL6Q9BZF3 934 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 L2HGDHQ9H9P8 463 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 TBC1D17Q9HA65 648 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 USP29Q9HBJ7 922 aa17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 NDRG2Q9UN36 371 aaKnown RBP17.28■□□□□ 0.36
PRKCSH-203ENST00000586486 KCNK1O00180 336 aa17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 TMCC1O94876 653 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms