RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 ANP32EQ9BTT0 268 aa16.24■□□□□ 0.19
TUBB3-214ENST00000557490 DHX35Q9H5Z1 703 aaKnown RBP16.24■□□□□ 0.19
TUBB3-214ENST00000557490 VPS45Q9NRW7 570 aa16.24■□□□□ 0.19
TUBB3-214ENST00000557490 GPATCH2LQ9NWQ4 482 aa16.24■□□□□ 0.19
TUBB3-214ENST00000557490 DONSONQ9NYP3 566 aa16.24■□□□□ 0.19
TUBB3-214ENST00000557490 WSB2Q9NYS7 404 aaPredicted RBP16.24■□□□□ 0.19
TUBB3-214ENST00000557490 ANAPC7Q9UJX3 599 aa16.24■□□□□ 0.19
TUBB3-214ENST00000557490 SCML1Q9UN30 329 aa16.24■□□□□ 0.19
TUBB3-214ENST00000557490 HS3ST2Q9Y278 367 aa16.24■□□□□ 0.19
TUBB3-214ENST00000557490 NCKAP1Q9Y2A7 1128 aa16.24■□□□□ 0.19
TUBB3-214ENST00000557490 EML5Q05BV3 1969 aa16.24■□□□□ 0.19
TUBB3-214ENST00000557490 IGSF10Q6WRI0 2623 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 MYO1FO00160 1098 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 FGF10O15520 208 aaPredicted RBP16.23■□□□□ 0.19
TUBB3-214ENST00000557490 RAMP2O60895 175 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 LRCH4O75427 683 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 H2AFZP0C0S5 128 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 ZNF806P0C7X5 589 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 C7P10643 843 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 PTGER3P43115 390 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 CLCN6P51797 869 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 ZNF75DP51815 510 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 SLC20A2Q08357 652 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 ELAVL3Q14576 367 aaKnown RBP16.23■□□□□ 0.19
TUBB3-214ENST00000557490 CCDC6Q16204 474 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 ASTE1Q2TB18 679 aaPredicted RBP16.23■□□□□ 0.19
TUBB3-214ENST00000557490 H2AFVQ71UI9 128 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 DSG4Q86SJ6 1040 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 FAM124AQ86V42 546 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 GAS2L3Q86XJ1 694 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 PSTKQ8IV42 348 aaKnown RBP16.23■□□□□ 0.19
TUBB3-214ENST00000557490 MMAAQ8IVH4 418 aaKnown RBP16.23■□□□□ 0.19
TUBB3-214ENST00000557490 FRS2Q8WU20 508 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 OR8D1Q8WZ84 308 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 FOXJ1Q92949 421 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 ARHGEF26Q96DR7 871 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 CCDC114Q96M63 670 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 CHP1Q99653 195 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 SNRNP25Q9BV90 132 aaKnown RBP16.23■□□□□ 0.19
TUBB3-214ENST00000557490 TMEM121BQ9BXQ6 578 aaPredicted RBP16.23■□□□□ 0.19
TUBB3-214ENST00000557490 MAGEH1Q9H213 219 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 PABPC3Q9H361 631 aaKnown RBP16.23■□□□□ 0.19
TUBB3-214ENST00000557490 NHEJ1Q9H9Q4 299 aaPredicted RBP16.23■□□□□ 0.19
TUBB3-214ENST00000557490 CTTNBP2NLQ9P2B4 639 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 HPCAL4Q9UM19 191 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 LHX6Q9UPM6 363 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 NEU3Q9UQ49 428 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 SPAG17Q6Q759 2223 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 CKAP5Q14008 2032 aa16.23■□□□□ 0.19
TUBB3-214ENST00000557490 SRRM3A6NNA2 597 aaPredicted RBP16.22■□□□□ 0.19
TUBB3-214ENST00000557490 EEF2KO00418 725 aaKnown RBP16.22■□□□□ 0.19
TUBB3-214ENST00000557490 DAPK3O43293 454 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 MT-CO1P00395 513 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 SRCP12931 536 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 VAV1P15498 845 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 ACVRL1P37023 503 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 PSMD8P48556 350 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 ZNF33AQ06730 810 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 SEMA3BQ13214 749 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 POLD3Q15054 466 aaPredicted RBP16.22■□□□□ 0.19
TUBB3-214ENST00000557490 CST6Q15828 149 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 AASDHQ4L235 1098 aaPredicted RBP16.22■□□□□ 0.19
TUBB3-214ENST00000557490 BOLA3Q53S33 107 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 PLA2G2CQ5R387 149 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 SYCP2LQ5T4T6 812 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 LINGO4Q6UY18 593 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 C12orf50Q8NA57 414 aaPredicted RBP16.22■□□□□ 0.19
TUBB3-214ENST00000557490 ZNF564Q8TBZ8 553 aaPredicted RBP16.22■□□□□ 0.19
TUBB3-214ENST00000557490 ARHGEF2Q92974 986 aaKnown RBP16.22■□□□□ 0.19
TUBB3-214ENST00000557490 MRFAP1L1Q96HT8 127 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 BTBD6Q96KE9 485 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 HSPA12BQ96MM6 686 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 PEBP4Q96S96 227 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 FAM129BQ96TA1 746 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 GPR174Q9BXC1 333 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 ACE2Q9BYF1 805 aaPredicted RBP16.22■□□□□ 0.19
TUBB3-214ENST00000557490 NDFIP2Q9NV92 336 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 UVRAGQ9P2Y5 699 aa16.22■□□□□ 0.19
TUBB3-214ENST00000557490 FARP1Q9Y4F1 1045 aaPredicted RBP16.22■□□□□ 0.19
TUBB3-214ENST00000557490 WASH4PA8MWX3 477 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 MID1O15344 667 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 BNIP3LO60238 219 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 ZMPSTE24O75844 475 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 KCNK5O95279 499 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 ADH1BP00325 375 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 IL1BP01584 269 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 GLDCP23378 1020 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 SLC8A1P32418 973 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 RECQLP46063 649 aaPredicted RBP16.21■□□□□ 0.19
TUBB3-214ENST00000557490 ZNF135P52742 658 aaPredicted RBP16.21■□□□□ 0.19
TUBB3-214ENST00000557490 GEMIN4P57678 1058 aaKnown RBP16.21■□□□□ 0.19
TUBB3-214ENST00000557490 CA9Q16790 459 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 PPP6R3Q5H9R7 873 aaPredicted RBP16.21■□□□□ 0.19
TUBB3-214ENST00000557490 FAM46CQ5VWP2 391 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 Q6ZVU0 165 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 USP30Q70CQ3 517 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 ZNF354CQ86Y25 554 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 SYT12Q8IV01 421 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 NIPA2Q8N8Q9 360 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 CADM4Q8NFZ8 388 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms