RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 NSUN2Q08J23 767 aaKnown RBP eCLIP4.32□□□□□ -1.72
CHD8-212ENST00000557329 PPIGQ13427 754 aaKnown RBP eCLIP4.32□□□□□ -1.72
CHD8-212ENST00000557329 DNASE1L3Q13609 305 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 ATP1A4Q13733 1029 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 KCNJ12Q14500 433 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 ZNF268Q14587 947 aaPredicted RBP4.32□□□□□ -1.72
CHD8-212ENST00000557329 TWIST1Q15672 202 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.32□□□□□ -1.72
CHD8-212ENST00000557329 PXDC1Q5TGL8 231 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 FKBP1CQ5VVH2 108 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 IZUMO3Q5VZ72 239 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 SLC18B1Q6NT16 456 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 RANBP10Q6VN20 620 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 LIX1LQ8IVB5 337 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 P3H2Q8IVL5 708 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 RNF152Q8N8N0 203 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 ACRBPQ8NEB7 543 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 PRSS3P2Q8NHM4 247 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 ATOH1Q92858 354 aaPredicted RBP4.32□□□□□ -1.72
CHD8-212ENST00000557329 SH2D3AQ9BRG2 576 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 ADGRE3Q9BY15 652 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 SLC29A3Q9BZD2 475 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 ZNF700Q9H0M5 742 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 AS3MTQ9HBK9 375 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 TXNRD2Q9NNW7 524 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 HELLSQ9NRZ9 838 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 TUBA8Q9NY65 449 aaPredicted RBP4.32□□□□□ -1.72
CHD8-212ENST00000557329 NFU1Q9UMS0 254 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 COG5Q9UP83 839 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 BTBD3Q9Y2F9 522 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 TBC1D30Q9Y2I9 924 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 COL2A1P02458 1487 aaPredicted RBP4.31□□□□□ -1.72
CHD8-212ENST00000557329 DNAH12Q6ZR08 3092 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 RPAP1Q9BWH6 1393 aaPredicted RBP4.31□□□□□ -1.72
CHD8-212ENST00000557329 DNAJC9-AS1A6NH13 148 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 DDTLA6NHG4 134 aaPredicted RBP4.31□□□□□ -1.72
CHD8-212ENST00000557329 RASA4BC9J798 803 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 KPNA5O15131 536 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 RASA4O43374 803 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 TIMP1P01033 207 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 TMIGD3P0DMS9 266 aaPredicted RBP4.31□□□□□ -1.72
CHD8-212ENST00000557329 APEHP13798 732 aaKnown RBP4.31□□□□□ -1.72
CHD8-212ENST00000557329 SLC5A1P13866 664 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 EGR1P18146 543 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 FPR3P25089 353 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 JAK3P52333 1124 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 HDAC1Q13547 482 aaPredicted RBP4.31□□□□□ -1.72
CHD8-212ENST00000557329 LAMB3Q13751 1172 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 UBE4AQ14139 1066 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 MAPKAPK3Q16644 382 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 EPHA10Q5JZY3 1008 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 FBXO38Q6PIJ6 1188 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 DEF8Q6ZN54 512 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 DPY19L3Q6ZPD9 716 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 C15orf52Q6ZUT6 534 aaKnown RBP4.31□□□□□ -1.72
CHD8-212ENST00000557329 YTHDF3Q7Z739 585 aaKnown RBP4.31□□□□□ -1.72
CHD8-212ENST00000557329 MRPL10Q7Z7H8 261 aaKnown RBP4.31□□□□□ -1.72
CHD8-212ENST00000557329 TXLNBQ8N3L3 684 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 OSR1Q8TAX0 266 aaPredicted RBP4.31□□□□□ -1.72
CHD8-212ENST00000557329 LRRC46Q96FV0 321 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 WDYHV1Q96HA8 205 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 CCDC138Q96M89 665 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 C5orf34Q96MH7 638 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 WDR24Q96S15 920 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 EIF3CQ99613 913 aaKnown RBP4.31□□□□□ -1.72
CHD8-212ENST00000557329 PUS3Q9BZE2 481 aaKnown RBP4.31□□□□□ -1.72
CHD8-212ENST00000557329 USP29Q9HBJ7 922 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 ARNT2Q9HBZ2 717 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 ASIC5Q9NY37 505 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 C9orf78Q9NZ63 289 aaPredicted RBP4.31□□□□□ -1.72
CHD8-212ENST00000557329 FAM50BQ9Y247 325 aa4.31□□□□□ -1.72
CHD8-212ENST00000557329 CACNA1AO00555 2505 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 ARAP2Q8WZ64 1704 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.3□□□□□ -1.72
CHD8-212ENST00000557329 CLIC1O00299 241 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 ZSCAN9O15535 394 aaPredicted RBP4.3□□□□□ -1.72
CHD8-212ENST00000557329 HOXB7P09629 217 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 IFIT1P09914 478 aaKnown RBP4.3□□□□□ -1.72
CHD8-212ENST00000557329 KCNA5P22460 613 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 GSTM5P46439 218 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 CCL23P55773 120 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 TBX4P57082 545 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 RPS13P62277 151 aaKnown RBP4.3□□□□□ -1.72
CHD8-212ENST00000557329 CBFBQ13951 182 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 KCNAB1Q14722 419 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 MFSD13AQ14CX5 517 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 DAZAP2Q15038 168 aaPredicted RBP4.3□□□□□ -1.72
CHD8-212ENST00000557329 ABLIM2Q6H8Q1 611 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 PSRC1Q6PGN9 363 aaPredicted RBP4.3□□□□□ -1.72
CHD8-212ENST00000557329 CRTC1Q6UUV9 634 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 KIAA0408Q6ZU52 694 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 C1QL2Q7Z5L3 287 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 DZIP1Q86YF9 867 aaKnown RBP4.3□□□□□ -1.72
CHD8-212ENST00000557329 UEVLDQ8IX04 471 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 CLASRPQ8N2M8 674 aaKnown RBP4.3□□□□□ -1.72
CHD8-212ENST00000557329 OR2C3Q8N628 320 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 C11orf44Q8N8P7 122 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 TRPV1Q8NER1 839 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 GRAMD1AQ96CP6 724 aa4.3□□□□□ -1.72
CHD8-212ENST00000557329 P2RY11Q96G91 374 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms