RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 PENKP01210 267 aaPredicted RBP10.41□□□□□ -0.74
SRP54-208ENST00000555557 CYP17A1P05093 508 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 TUBBP07437 444 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 PSMB4P28070 264 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 HLA-FP30511 346 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 IFNAR2P48551 515 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 OXCT1P55809 520 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 ZNF33AQ06730 810 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 LMAN2Q12907 356 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 MTM1Q13496 603 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 BRD3Q15059 726 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 RNASEH2BQ5TBB1 312 aaKnown RBP10.41□□□□□ -0.74
SRP54-208ENST00000555557 ASTLQ6HA08 431 aaPredicted RBP10.41□□□□□ -0.74
SRP54-208ENST00000555557 TIGD7Q6NT04 549 aaPredicted RBP10.41□□□□□ -0.74
SRP54-208ENST00000555557 HIBCHQ6NVY1 386 aaPredicted RBP10.41□□□□□ -0.74
SRP54-208ENST00000555557 LINGO4Q6UY18 593 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 OTOP3Q7RTS5 596 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 FIBINQ8TAL6 211 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 TTC8Q8TAM2 541 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 ANKRD7Q92527 254 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 SUSD6Q92537 303 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 RUBCNQ92622 972 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 OTUB2Q96DC9 234 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 ALG14Q96F25 216 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 TEKT5Q96M29 485 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 ACE2Q9BYF1 805 aaPredicted RBP10.41□□□□□ -0.74
SRP54-208ENST00000555557 ABCB8Q9NUT2 735 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 VPS28Q9UK41 221 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 OR51B4Q9Y5P0 310 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 NYNRINQ9P2P1 1898 aaKnown RBP10.41□□□□□ -0.74
SRP54-208ENST00000555557 TTC24A2A3L6 582 aaPredicted RBP10.41□□□□□ -0.74
SRP54-208ENST00000555557 MTSS1O43312 755 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 KDELR3O43731 214 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 OPHN1O60890 802 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 HLA-DQB2P05538 268 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 FOSL2P15408 326 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 MAXP61244 160 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 IFI35P80217 286 aaPredicted RBP10.41□□□□□ -0.74
SRP54-208ENST00000555557 IL10RBQ08334 325 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 CCDC117Q8IWD4 279 aaPredicted RBP10.41□□□□□ -0.74
SRP54-208ENST00000555557 MFSD6LQ8IWD5 586 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 NAT8LQ8N9F0 302 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 MAML1Q92585 1016 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 IL12RB2Q99665 862 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 FAM83CQ9BQN1 747 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 UBE2ZQ9H832 354 aaPredicted RBP10.41□□□□□ -0.74
SRP54-208ENST00000555557 PDFQ9HBH1 243 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 UBP1Q9NZI7 540 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 INTS6Q9UL03 887 aaKnown RBP10.41□□□□□ -0.74
SRP54-208ENST00000555557 FARP1Q9Y4F1 1045 aaPredicted RBP10.41□□□□□ -0.74
SRP54-208ENST00000555557 SHROOM3Q8TF72 1996 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 DOCK8Q8NF50 2099 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.4□□□□□ -0.74
SRP54-208ENST00000555557 GJB3O75712 270 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 NEBLO76041 1014 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 TMEM63AO94886 807 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 CD160O95971 181 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 APRTP07741 180 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 NFKB1P19838 968 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 RENBPP51606 427 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 ARF5P84085 180 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 OLIG2Q13516 323 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 HNRNPDQ14103 355 aaKnown RBP10.4□□□□□ -0.74
SRP54-208ENST00000555557 LBRQ14739 615 aaKnown RBP10.4□□□□□ -0.74
SRP54-208ENST00000555557 PARP6Q2NL67 630 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 BEND6Q5SZJ8 279 aaPredicted RBP10.4□□□□□ -0.74
SRP54-208ENST00000555557 MARC1Q5VT66 337 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 RNF43Q68DV7 783 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 ZNF783Q6ZMS7 281 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 C12orf40Q86WS4 652 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 PPIL6Q8IXY8 311 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 PGBD5Q8N414 524 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 SPATA22Q8NHS9 363 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 AENQ8WTP8 325 aaKnown RBP10.4□□□□□ -0.74
SRP54-208ENST00000555557 PRCCQ92733 491 aaPredicted RBP10.4□□□□□ -0.74
SRP54-208ENST00000555557 ZBTB9Q96C00 473 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 LMLNQ96KR4 655 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 NECTIN4Q96NY8 510 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 FMO2Q99518 471 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 VAT1Q99536 393 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 GORASP1Q9BQQ3 440 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 NT5MQ9NPB1 228 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 HPS4Q9NQG7 708 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 THG1LQ9NWX6 298 aaKnown RBP10.4□□□□□ -0.74
SRP54-208ENST00000555557 OBP2AQ9NY56 170 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 GTSE1Q9NYZ3 720 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 KIAA1522Q9P206 1035 aaPredicted RBP10.4□□□□□ -0.74
SRP54-208ENST00000555557 RSPH14Q9UHP6 348 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 TRHDEQ9UKU6 1024 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 HPCAL4Q9UM19 191 aa10.4□□□□□ -0.74
SRP54-208ENST00000555557 MUSKO15146 869 aa10.39□□□□□ -0.75
SRP54-208ENST00000555557 ZMPSTE24O75844 475 aa10.39□□□□□ -0.75
SRP54-208ENST00000555557 MT-CO1P00395 513 aa10.39□□□□□ -0.75
SRP54-208ENST00000555557 ADH5P11766 374 aa10.39□□□□□ -0.75
SRP54-208ENST00000555557 PSMC3P17980 439 aa10.39□□□□□ -0.75
SRP54-208ENST00000555557 GRIA1P42261 906 aa10.39□□□□□ -0.75
SRP54-208ENST00000555557 MMP13P45452 471 aa10.39□□□□□ -0.75
SRP54-208ENST00000555557 ITKQ08881 620 aa10.39□□□□□ -0.75
SRP54-208ENST00000555557 FCHO2Q0JRZ9 810 aa10.39□□□□□ -0.75
SRP54-208ENST00000555557 SPARCL1Q14515 664 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms