RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 NLGN3Q9NZ94 848 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 VANGL2Q9ULK5 521 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 SSUH2Q9Y2M2 353 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 ZNF462Q96JM2 2506 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 SLC31A1O15431 190 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 CLDN11O75508 207 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 MT-CO1P00395 513 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 MPOP05164 745 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 ZNF18P17022 549 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 BMP6P22004 513 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 HNRNPA2B1P22626 353 aaKnown RBP17.09■□□□□ 0.33
CPSF7-225ENST00000545934 GNA15P30679 374 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 CHRNA3P32297 505 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 PPP1R2P41236 205 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 LSSP48449 732 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 MTA1Q13330 715 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 STIM1Q13586 685 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 TMEM259Q4ZIN3 620 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 C14orf80Q86SX3 495 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 LSMEM2Q8N112 164 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 SNRNP27Q8WVK2 155 aaKnown RBP17.09■□□□□ 0.33
CPSF7-225ENST00000545934 KLK6Q92876 244 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 APOLD1Q96LR9 279 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 NOX5Q96PH1 765 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 DEPDC7Q96QD5 511 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 FZD3Q9NPG1 666 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 ASCL3Q9NQ33 180 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 VPS28Q9UK41 221 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 ZFR2Q9UPR6 939 aaKnown RBP17.09■□□□□ 0.33
CPSF7-225ENST00000545934 RP1P56715 2156 aa17.09■□□□□ 0.33
CPSF7-225ENST00000545934 FLNBO75369 2602 aaKnown RBP17.08■□□□□ 0.33
CPSF7-225ENST00000545934 LRRK1Q38SD2 2015 aa17.08■□□□□ 0.33
CPSF7-225ENST00000545934 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.08■□□□□ 0.32
CPSF7-225ENST00000545934 CAPN8A6NHC0 703 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 BECN2A8MW95 431 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 PPP1R3GB7ZBB8 358 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 FFAR2O15552 330 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 THAP12O43422 761 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 HSF2BPO75031 334 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 PAGE1O75459 146 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 AFPP02771 609 aaKnown RBP17.08■□□□□ 0.32
CPSF7-225ENST00000545934 CDH4P55283 916 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 TMPRSS3P57727 454 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 ERVPABLB-1P60509 514 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 ZNF177Q13360 481 aaPredicted RBP17.08■□□□□ 0.32
CPSF7-225ENST00000545934 HS1BP3Q53T59 392 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 EFHC1Q5JVL4 640 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 OTUD1Q5VV17 481 aaPredicted RBP17.08■□□□□ 0.32
CPSF7-225ENST00000545934 IGF2-ASQ6U949 168 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 TMC6Q7Z403 805 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 ZNF683Q8IZ20 524 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 FAM174AQ8TBP5 190 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 CPXM1Q96SM3 734 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 MYOCQ99972 504 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 USP29Q9HBJ7 922 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 UBE2TQ9NPD8 197 aaPredicted RBP17.08■□□□□ 0.32
CPSF7-225ENST00000545934 MAN1B1Q9UKM7 699 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 SCN8AQ9UQD0 1980 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 LRP4O75096 1905 aa17.08■□□□□ 0.32
CPSF7-225ENST00000545934 SYNJ2BP-COX16A0A087WUM0 186 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 I6L893 689 aaPredicted RBP17.07■□□□□ 0.32
CPSF7-225ENST00000545934 K7ERQ8 282 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 SCAMP1O15126 338 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 SMAD6O43541 496 aaKnown RBP17.07■□□□□ 0.32
CPSF7-225ENST00000545934 CSO75390 466 aaKnown RBP17.07■□□□□ 0.32
CPSF7-225ENST00000545934 CNTN5O94779 1100 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 MYF5P13349 255 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 AKT2P31751 481 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 GGCXP38435 758 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 UCNP55089 124 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 CLDN2P57739 230 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 GABREP78334 506 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 RHDQ02161 417 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 ARTNQ5T4W7 220 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 ISM2Q6H9L7 571 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 ENOSF1Q7L5Y1 443 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 ELOA2Q8IYF1 753 aaPredicted RBP17.07■□□□□ 0.32
CPSF7-225ENST00000545934 CHST14Q8NCH0 376 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 RNF34Q969K3 372 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 BMFQ96LC9 184 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 CALN1Q9BXU9 219 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 HDAC8Q9BY41 377 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 POLR1BQ9H9Y6 1135 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 ANLNQ9NQW6 1124 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 COX16Q9P0S2 106 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 VPS51Q9UID3 782 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 PCDHGC3Q9UN70 934 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 HS3ST3A1Q9Y663 406 aa17.07■□□□□ 0.32
CPSF7-225ENST00000545934 A0A1W2PNU3 283 aaPredicted RBP17.06■□□□□ 0.32
CPSF7-225ENST00000545934 K7ESM1 405 aa17.06■□□□□ 0.32
CPSF7-225ENST00000545934 KPNA3O00505 521 aaPredicted RBP17.06■□□□□ 0.32
CPSF7-225ENST00000545934 BNIP3LO60238 219 aa17.06■□□□□ 0.32
CPSF7-225ENST00000545934 SNAP91O60641 907 aa17.06■□□□□ 0.32
CPSF7-225ENST00000545934 USP12O75317 370 aa17.06■□□□□ 0.32
CPSF7-225ENST00000545934 ZNF821O75541 412 aaPredicted RBP17.06■□□□□ 0.32
CPSF7-225ENST00000545934 DAB1O75553 588 aa17.06■□□□□ 0.32
CPSF7-225ENST00000545934 GNA14O95837 355 aa17.06■□□□□ 0.32
CPSF7-225ENST00000545934 PRNPP04156 253 aa17.06■□□□□ 0.32
CPSF7-225ENST00000545934 ALPPL2P10696 532 aa17.06■□□□□ 0.32
CPSF7-225ENST00000545934 CLCN6P51797 869 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms