RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 AGAP2Q99490 1192 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 PKP2Q99959 881 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 MRPL1Q9BYD6 325 aaKnown RBP8.9□□□□□ -0.98
TDP1-204ENST00000545686 GBA3Q9H227 469 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 RHOJQ9H4E5 214 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 TASP1Q9H6P5 420 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 MRM3Q9HC36 420 aaKnown RBP8.9□□□□□ -0.98
TDP1-204ENST00000545686 APPL1Q9UKG1 709 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 TLK1Q9UKI8 766 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 PPP2R3BQ9Y5P8 575 aa8.9□□□□□ -0.98
TDP1-204ENST00000545686 E2F8A0AVK6 867 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 CCDC160A6NGH7 325 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 NPHS1O60500 1241 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 VAPBO95292 243 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 PYGLP06737 847 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 FAM200BP0CF97 657 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 LCP1P13796 627 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 ENO3P13929 434 aaPredicted RBP8.9□□□□□ -0.99
TDP1-204ENST00000545686 YBX3P16989 372 aaKnown RBP eCLIP8.9□□□□□ -0.99
TDP1-204ENST00000545686 ZNF23P17027 643 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 CYP2B6P20813 491 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 PTPN3P26045 913 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 INHBCP55103 352 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 MS4A2Q01362 244 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 PPIDQ08752 370 aaKnown RBP8.9□□□□□ -0.99
TDP1-204ENST00000545686 PPP2R5DQ14738 602 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 MYBPC3Q14896 1274 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 MAPRE2Q15555 327 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 KIZQ2M2Z5 673 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 INTS6LQ5JSJ4 861 aaKnown RBP8.9□□□□□ -0.99
TDP1-204ENST00000545686 OTUD1Q5VV17 481 aaPredicted RBP8.9□□□□□ -0.99
TDP1-204ENST00000545686 ITPRIPL1Q6GPH6 555 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 TMEM151AQ8N4L1 468 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 BEST2Q8NFU1 509 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 OR6B3Q8NGW1 331 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 MIPOL1Q8TD10 442 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 DUS3LQ96G46 650 aaKnown RBP8.9□□□□□ -0.99
TDP1-204ENST00000545686 ATXN7L3BQ96GX2 97 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 ZNF597Q96LX8 424 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 KLHL32Q96NJ5 620 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 SLC9A7Q96T83 725 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 OSBPL11Q9BXB4 747 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 CEP41Q9BYV8 373 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 NUF2Q9BZD4 464 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 LRRC4Q9HBW1 653 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 IRAK4Q9NWZ3 460 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 GALNT8Q9NY28 637 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 TRHDEQ9UKU6 1024 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 MIA3Q5JRA6 1907 aa8.9□□□□□ -0.99
TDP1-204ENST00000545686 TK2O00142 265 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 EEF2KO00418 725 aaKnown RBP8.89□□□□□ -0.99
TDP1-204ENST00000545686 XPO1O14980 1071 aaKnown RBP8.89□□□□□ -0.99
TDP1-204ENST00000545686 SLC25A27O95847 323 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 ATP6V1B1P15313 513 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 ZNF26P17031 533 aaPredicted RBP8.89□□□□□ -0.99
TDP1-204ENST00000545686 NOS2P35228 1153 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 DPP6P42658 865 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 PKNOX1P55347 436 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 CDKL1Q00532 357 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 TRAP1Q12931 704 aaKnown RBP8.89□□□□□ -0.99
TDP1-204ENST00000545686 DCTN2Q13561 401 aaKnown RBP8.89□□□□□ -0.99
TDP1-204ENST00000545686 SLC12A1Q13621 1099 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 PTK2BQ14289 1009 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 DLG2Q15700 870 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 ZBTB6Q15916 424 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 UGP2Q16851 508 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 TREML2Q5T2D2 321 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 C6orf52Q5T4I8 152 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 DEFB106AQ8N104 65 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 DNAAF3Q8N9W5 541 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 AGR3Q8TD06 166 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 CNKSR2Q8WXI2 1034 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 SNX27Q96L92 541 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 NPY6RQ99463 290 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 VAT1Q99536 393 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 CAB39LQ9H9S4 337 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 PREBQ9HCU5 417 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 C20orf96Q9NUD7 363 aaPredicted RBP8.89□□□□□ -0.99
TDP1-204ENST00000545686 SARDHQ9UL12 918 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 STAP1Q9ULZ2 295 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 AKT3Q9Y243 479 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 COPG1Q9Y678 874 aaKnown RBP8.89□□□□□ -0.99
TDP1-204ENST00000545686 AK5Q9Y6K8 562 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 TCAF2A6NFQ2 919 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 UNCXA6NJT0 531 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 TARM1B6A8C7 271 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 HNRNPRO43390 633 aaKnown RBP8.89□□□□□ -0.99
TDP1-204ENST00000545686 TRMUO75648 421 aaKnown RBP8.89□□□□□ -0.99
TDP1-204ENST00000545686 SBK3P0C264 359 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 CDK4P11802 303 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 INSRRP14616 1297 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 CDH2P19022 906 aaPredicted RBP8.89□□□□□ -0.99
TDP1-204ENST00000545686 ADORA2BP29275 332 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 ALDH3B2P48448 385 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 HCAR3P49019 387 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 TUBA4AP68366 448 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 SCAPQ12770 1279 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 ZC3HC1Q86WB0 502 aaKnown RBP8.89□□□□□ -0.99
TDP1-204ENST00000545686 CARM1Q86X55 608 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 LSMEM2Q8N112 164 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms