RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 SLC29A1Q99808 456 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 TDRKHQ9Y2W6 561 aaKnown RBP10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 COPG1Q9Y678 874 aaKnown RBP10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 VAPBO95292 243 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 CKMT2P17540 419 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 NFKB1P19838 968 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 PTPN3P26045 913 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 RPL5P46777 297 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 CXCR3P49682 368 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 SERPINB8P50452 374 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 CDK18Q07002 472 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 MPP3Q13368 585 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 ART3Q13508 389 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 MYBPC3Q14896 1274 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 FSCBQ5H9T9 825 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 NOMO2Q5JPE7 1267 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 SEL1L3Q68CR1 1132 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 PIGZQ86VD9 579 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 KCNMB4Q86W47 210 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 TMEM151AQ8N4L1 468 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 RIN3Q8TB24 985 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 DGCR14Q96DF8 476 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 C12orf42Q96LP6 360 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 CIB1Q99828 191 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 ILKAPQ9H0C8 392 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 RBM38Q9H0Z9 239 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 IL1RL2Q9HB29 575 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 PRMT7Q9NVM4 692 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 XPR1Q9UBH6 696 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 GIMAP2Q9UG22 337 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 FZD10Q9ULW2 581 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 RUVBL2Q9Y230 463 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 RNF11Q9Y3C5 154 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 MT-CYBP00156 380 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 FAM200BP0CF97 657 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 CDK4P11802 303 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 CNTFP26441 200 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 PRAMEP78395 509 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 TMED1Q13445 227 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 USP10Q14694 798 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 POU6F1Q14863 301 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 MTX3Q5HYI7 312 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 RARS2Q5T160 578 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 ARHGAP36Q6ZRI8 547 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 FSTL5Q8N475 847 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 MARVELD2Q8N4S9 558 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 CHST13Q8NET6 341 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 NXNL1Q96CM4 212 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 HSPBAP1Q96EW2 488 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 CPNE1Q99829 537 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 RNF39Q9H2S5 420 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 CAAP1Q9H8G2 361 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 COQ10BQ9H8M1 238 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 SLC2A6Q9UGQ3 507 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 PHF24Q9UPV7 400 aa10.54□□□□□ -0.72
CDC42SE1-207ENST00000540998 RGSL1A5PLK6 1076 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 E7ENX8 843 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 NRP1O14786 923 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 TPST1O60507 370 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 CLIC3O95833 236 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 MCF2P10911 925 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 ERCC2P18074 760 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 KCNA5P22460 613 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 ATICP31939 592 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 SPRP35270 261 aaPredicted RBP10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 STT3AP46977 705 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 EDEM1Q92611 657 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 EME1Q96AY2 570 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 ZNF419Q96HQ0 510 aaPredicted RBP10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 RHOBTB2Q9BYZ6 727 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 GCOM2Q9BZD3 368 aaPredicted RBP10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 OXSMQ9NWU1 459 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 GTSE1Q9NYZ3 720 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 CCDC167Q9P0B6 97 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 ZNF112Q9UJU3 913 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 SSC5DA1L4H1 1573 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 FAM149AA5PLN7 773 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 TCAF2A6NFQ2 919 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 C19orf81C9J6K1 198 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 CCL22O00626 93 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 HDAC3O15379 428 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 DLX3O60479 287 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 GARSP41250 739 aaKnown RBP10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 NR2C2P49116 596 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 RPL14P50914 215 aaKnown RBP10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 COG7P83436 770 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 MAP7Q14244 749 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 SH2D4BQ5SQS7 431 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 MAP3K21Q5TCX8 1036 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 SLC26A9Q7LBE3 791 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 CENPLQ8N0S6 344 aaPredicted RBP10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 HMGCLL1Q8TB92 370 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 SLC7A14Q8TBB6 771 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 AFG1LQ8WV93 481 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 CENPIQ92674 756 aaPredicted RBP10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 LRCH3Q96II8 777 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 ASB7Q9H672 318 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 TIMM13Q9Y5L4 95 aaPredicted RBP10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 SNX13Q9Y5W8 968 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms