RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 KPNA3O00505 521 aaPredicted RBP16.51■□□□□ 0.23
PTPRU-210ENST00000527027 HSF2BPO75031 334 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 PIAS2O75928 621 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 MT-CO1P00395 513 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 CTSLP07711 333 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 ALPPL2P10696 532 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 PLA2G2AP14555 144 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 AKT2P31751 481 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 CHRNA3P32297 505 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 CDH4P55283 916 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 MARSP56192 900 aaKnown RBP16.51■□□□□ 0.23
PTPRU-210ENST00000527027 KRT83P78385 493 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 ZNF284Q2VY69 593 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 C5orf22Q49AR2 442 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 ENOSF1Q7L5Y1 443 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 C14orf80Q86SX3 495 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 ATP11CQ8NB49 1132 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 OR2A12Q8NGT7 310 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 PPP1R13BQ96KQ4 1090 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 CCDC114Q96M63 670 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 CPXM1Q96SM3 734 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 MUC3BQ9H195 1237 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 NEMP2A6NFY4 417 aa16.5■□□□□ 0.23
PTPRU-210ENST00000527027 CAPN8A6NHC0 703 aa16.5■□□□□ 0.23
PTPRU-210ENST00000527027 FFAR2O15552 330 aa16.5■□□□□ 0.23
PTPRU-210ENST00000527027 PAGE1O75459 146 aa16.5■□□□□ 0.23
PTPRU-210ENST00000527027 GRAP2O75791 330 aa16.5■□□□□ 0.23
PTPRU-210ENST00000527027 HNRNPA2B1P22626 353 aaKnown RBP16.5■□□□□ 0.23
PTPRU-210ENST00000527027 PCBP4P57723 403 aaKnown RBP16.5■□□□□ 0.23
PTPRU-210ENST00000527027 CFHR1Q03591 330 aa16.5■□□□□ 0.23
PTPRU-210ENST00000527027 NME3Q13232 169 aa16.5■□□□□ 0.23
PTPRU-210ENST00000527027 PCSK4Q6UW60 755 aa16.5■□□□□ 0.23
PTPRU-210ENST00000527027 ELOA2Q8IYF1 753 aaPredicted RBP16.5■□□□□ 0.23
PTPRU-210ENST00000527027 OR13H1Q8NG92 308 aa16.5■□□□□ 0.23
PTPRU-210ENST00000527027 ARRDC3Q96B67 414 aa16.5■□□□□ 0.23
PTPRU-210ENST00000527027 IFT43Q96FT9 208 aa16.5■□□□□ 0.23
PTPRU-210ENST00000527027 HIC2Q96JB3 615 aa16.5■□□□□ 0.23
PTPRU-210ENST00000527027 FAM81BQ96LP2 452 aa16.5■□□□□ 0.23
PTPRU-210ENST00000527027 DEPDC7Q96QD5 511 aa16.5■□□□□ 0.23
PTPRU-210ENST00000527027 C2orf49Q9BVC5 232 aaPredicted RBP16.5■□□□□ 0.23
PTPRU-210ENST00000527027 CALN1Q9BXU9 219 aa16.5■□□□□ 0.23
PTPRU-210ENST00000527027 SIK2Q9H0K1 926 aa16.5■□□□□ 0.23
PTPRU-210ENST00000527027 FZD3Q9NPG1 666 aa16.5■□□□□ 0.23
PTPRU-210ENST00000527027 DYRK4Q9NR20 520 aa16.5■□□□□ 0.23
PTPRU-210ENST00000527027 NLGN3Q9NZ94 848 aa16.5■□□□□ 0.23
PTPRU-210ENST00000527027 ERVH48-1M5A8F1 160 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 SNAP91O60641 907 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 DXOO77932 396 aaKnown RBP16.49■□□□□ 0.23
PTPRU-210ENST00000527027 PCDH8O95206 1070 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 PRNPP04156 253 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 MPOP05164 745 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 GP1BAP07359 652 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 BMP6P22004 513 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 GGCXP38435 758 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 USP8P40818 1118 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 LSSP48449 732 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 DUSP3P51452 185 aaPredicted RBP16.49■□□□□ 0.23
PTPRU-210ENST00000527027 UCNP55089 124 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 CLDN2P57739 230 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 BROXQ5VW32 411 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 C11orf57Q6ZUT1 292 aaPredicted RBP16.49■□□□□ 0.23
PTPRU-210ENST00000527027 ERN2Q76MJ5 926 aaKnown RBP16.49■□□□□ 0.23
PTPRU-210ENST00000527027 ABI3BPQ7Z7G0 1075 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 DCP2Q8IU60 420 aaKnown RBP16.49■□□□□ 0.23
PTPRU-210ENST00000527027 FAM181AQ8N9Y4 354 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 FAM174AQ8TBP5 190 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 NAF1Q96HR8 494 aaKnown RBP16.49■□□□□ 0.23
PTPRU-210ENST00000527027 APOLD1Q96LR9 279 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 NOX5Q96PH1 765 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 PSMB7Q99436 277 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 SRRTQ9BXP5 876 aaKnown RBP16.49■□□□□ 0.23
PTPRU-210ENST00000527027 HDAC8Q9BY41 377 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 ABCG4Q9H172 646 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 CAAP1Q9H8G2 361 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 USP29Q9HBJ7 922 aa16.49■□□□□ 0.23
PTPRU-210ENST00000527027 ZFR2Q9UPR6 939 aaKnown RBP16.49■□□□□ 0.23
PTPRU-210ENST00000527027 BECN2A8MW95 431 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 K7ERQ8 282 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 M0QYT0 321 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 SCAMP1O15126 338 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 SMAD6O43541 496 aaKnown RBP16.48■□□□□ 0.23
PTPRU-210ENST00000527027 USP12O75317 370 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 CSO75390 466 aaKnown RBP16.48■□□□□ 0.23
PTPRU-210ENST00000527027 CNTN5O94779 1100 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 RHOCP08134 193 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 NOS2P35228 1153 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 CLCN6P51797 869 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 SNX16P57768 344 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 ERVPABLB-1P60509 514 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 HNRNPKP61978 463 aaKnown RBP eCLIP16.48■□□□□ 0.23
PTPRU-210ENST00000527027 GABREP78334 506 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 RHDQ02161 417 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 ALFQ53S48 1182 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 SEL1L3Q68CR1 1132 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 OR6B2Q6IFH4 312 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 GJB7Q6PEY0 223 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 OLFML1Q6UWY5 402 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 GCNT7Q6ZNI0 430 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 Q6ZSR6 202 aa16.48■□□□□ 0.23
PTPRU-210ENST00000527027 FAM183BPQ6ZVS7 135 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms