RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 POM121BA6NF01 834 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 H3BQ06 376 aaPredicted RBP2.89□□□□□ -1.95
SKP1-204ENST00000517691 TMEM189-UBE2V1I3L0A0 370 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 PES1O00541 588 aaKnown RBP2.89□□□□□ -1.95
SKP1-204ENST00000517691 PIRO00625 290 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 IKBKBO14920 756 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 SLC16A3O15427 465 aaKnown RBP2.89□□□□□ -1.95
SKP1-204ENST00000517691 TEX28O15482 410 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 FFAR2O15552 330 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 B3GALNT1O75752 331 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 URI1O94763 535 aaPredicted RBP2.89□□□□□ -1.95
SKP1-204ENST00000517691 LETM1O95202 739 aaPredicted RBP2.89□□□□□ -1.95
SKP1-204ENST00000517691 GLUD1P00367 558 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 MT-ND3P03897 115 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 GSNP06396 782 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 CKMP06732 381 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 CCDC192P0DO97 292 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 LCP1P13796 627 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 SIP14410 1827 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 IFNGR1P15260 489 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 EPCAMP16422 314 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 CTSSP25774 331 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 HTR1BP28222 390 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 MTIF2P46199 727 aaKnown RBP2.89□□□□□ -1.95
SKP1-204ENST00000517691 PAPOLAP51003 745 aaKnown RBP2.89□□□□□ -1.95
SKP1-204ENST00000517691 AP3M2P53677 418 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 MYL6P60660 151 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 TNNC1P63316 161 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 TFF2Q03403 129 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 YWHAHQ04917 246 aaPredicted RBP2.89□□□□□ -1.95
SKP1-204ENST00000517691 IFT88Q13099 833 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 ADAM15Q13444 863 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 NFKBIBQ15653 356 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 PSMD5Q16401 504 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 STX1AQ16623 288 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 NFIL3Q16649 462 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 DUSP6Q16828 381 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 TIGD6Q17RP2 521 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 ZNF699Q32M78 642 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 DPCR1Q3MIW9 517 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 WDR72Q3MJ13 1102 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 ZCWPW2Q504Y3 356 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 HSP90AA4PQ58FG1 418 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 ZNF362Q5T0B9 420 aaPredicted RBP2.89□□□□□ -1.95
SKP1-204ENST00000517691 KLHDC7AQ5VTJ3 777 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 WSCD1Q658N2 575 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 ARID2Q68CP9 1835 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 TTI2Q6NXR4 508 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 RPUSD3Q6P087 351 aaKnown RBP2.89□□□□□ -1.95
SKP1-204ENST00000517691 CRTC3Q6UUV7 619 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 CD300LGQ6UXG3 332 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 LCNL1Q6ZST4 164 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 BEND4Q6ZU67 534 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 C22orf34Q6ZV56 151 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 LRRC52Q8N7C0 313 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 EFHBQ8N7U6 833 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 PPM1NQ8N819 430 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 CCDC150Q8NCX0 1101 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 LNX1Q8TBB1 728 aaPredicted RBP2.89□□□□□ -1.95
SKP1-204ENST00000517691 PLEKHO2Q8TD55 490 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 HTRA1Q92743 480 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 C1GALT1C1Q96EU7 318 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 COX4I2Q96KJ9 171 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 ZNF560Q96MR9 790 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 CDCA3Q99618 268 aaPredicted RBP2.89□□□□□ -1.95
SKP1-204ENST00000517691 CLSTN3Q9BQT9 956 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 TXLNGYQ9BZA5 131 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 SNX25Q9H3E2 840 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 CNTD2Q9H8S5 307 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.89□□□□□ -1.951e-6■■□□□ 12.9
SKP1-204ENST00000517691 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.89□□□□□ -1.95
SKP1-204ENST00000517691 HAUS2Q9NVX0 235 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 ANO10Q9NW15 660 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 OXSMQ9NWU1 459 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 NSMCE4AQ9NXX6 385 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 WDR35Q9P2L0 1181 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 B4GALT6Q9UBX8 382 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 DSEQ9UL01 958 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 BARX2Q9UMQ3 279 aaPredicted RBP2.89□□□□□ -1.95
SKP1-204ENST00000517691 COG5Q9UP83 839 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 CDY1Q9Y6F8 540 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 CAPN6Q9Y6Q1 641 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 U3KQE9 123 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 TTC3P53804 2025 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 TRANK1O15050 2925 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 SYCE3A1L190 88 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 WASH4PA8MWX3 477 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 M0QZQ0 153 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 FOXN3O00409 490 aaPredicted RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 TRIM38O00635 465 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 AQP7O14520 342 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 PRRG1O14668 218 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 SYN3O14994 580 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 MAPK13O15264 365 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 ADAM12O43184 909 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 SLC7A4O43246 635 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 HOXC11O43248 304 aaPredicted RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 GJB3O75712 270 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 VNN1O95497 513 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 GNA14O95837 355 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms