RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 ACRP10323 421 aa7.57□□□□□ -1.2
CLIP1-205ENST00000514271 MYL2P10916 166 aa7.57□□□□□ -1.2
CLIP1-205ENST00000514271 PORP16435 677 aaPredicted RBP7.57□□□□□ -1.2
CLIP1-205ENST00000514271 NOP14P78316 857 aaKnown RBP7.57□□□□□ -1.2
CLIP1-205ENST00000514271 ARHGAP8P85298 464 aa7.57□□□□□ -1.2
CLIP1-205ENST00000514271 DSC1Q08554 894 aa7.57□□□□□ -1.2
CLIP1-205ENST00000514271 GRSF1Q12849 480 aaKnown RBP eCLIP7.57□□□□□ -1.2
CLIP1-205ENST00000514271 B3GNT6Q6ZMB0 384 aa7.57□□□□□ -1.2
CLIP1-205ENST00000514271 CENPUQ71F23 418 aa7.57□□□□□ -1.2
CLIP1-205ENST00000514271 RTN4RL1Q86UN2 441 aaPredicted RBP7.57□□□□□ -1.2
CLIP1-205ENST00000514271 WDR49Q8IV35 697 aa7.57□□□□□ -1.2
CLIP1-205ENST00000514271 FBXW8Q8N3Y1 598 aa7.57□□□□□ -1.2
CLIP1-205ENST00000514271 FRS2Q8WU20 508 aa7.57□□□□□ -1.2
CLIP1-205ENST00000514271 KHSRPQ92945 711 aaKnown RBP eCLIP7.57□□□□□ -1.22e-6■■■■□ 20.7
CLIP1-205ENST00000514271 ZNF653Q96CK0 615 aa7.57□□□□□ -1.2
CLIP1-205ENST00000514271 SLC28A3Q9HAS3 691 aa7.57□□□□□ -1.2
CLIP1-205ENST00000514271 NGRNQ9NPE2 291 aaKnown RBP7.57□□□□□ -1.2
CLIP1-205ENST00000514271 RNF19AQ9NV58 838 aa7.57□□□□□ -1.2
CLIP1-205ENST00000514271 COMMD8Q9NX08 183 aa7.57□□□□□ -1.2
CLIP1-205ENST00000514271 TUBA8Q9NY65 449 aaPredicted RBP7.57□□□□□ -1.2
CLIP1-205ENST00000514271 POLG2Q9UHN1 485 aa7.57□□□□□ -1.2
CLIP1-205ENST00000514271 GINS2Q9Y248 185 aa7.57□□□□□ -1.2
CLIP1-205ENST00000514271 WDR37Q9Y2I8 494 aa7.57□□□□□ -1.2
CLIP1-205ENST00000514271 SHROOM3Q8TF72 1996 aa7.57□□□□□ -1.2
CLIP1-205ENST00000514271 TMEM238LA0A1B0GVL6 79 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 C7orf72A4D263 438 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 MAP3K7O43318 606 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 MGEA5O60502 916 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 RSL1D1O76021 490 aaKnown RBP7.56□□□□□ -1.2
CLIP1-205ENST00000514271 ALDOAP04075 364 aaKnown RBP7.56□□□□□ -1.2
CLIP1-205ENST00000514271 ENPP1P22413 925 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 DCKP27707 260 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 BMPR1AP36894 532 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 RPL7AP62424 266 aaKnown RBP7.56□□□□□ -1.2
CLIP1-205ENST00000514271 BST1Q10588 318 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 SMARCB1Q12824 385 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 HERC3Q15034 1050 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 TGFBIQ15582 683 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 KLHL38Q2WGJ6 581 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 ATP13A4Q4VNC1 1196 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 PPP1R2P3Q6NXS1 205 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 OTOP2Q7RTS6 562 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 SLC4A11Q8NBS3 891 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 ZFRQ96KR1 1074 aaKnown RBP7.56□□□□□ -1.2
CLIP1-205ENST00000514271 C8orf48Q96LL4 319 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 PEBP4Q96S96 227 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 TCHPQ9BT92 498 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 C1QTNF1Q9BXJ1 281 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 SDCBP2Q9H190 292 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 LHX5Q9H2C1 402 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 SPG21Q9NZD8 308 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 COLQQ9Y215 455 aaPredicted RBP7.56□□□□□ -1.2
CLIP1-205ENST00000514271 G3V2L1 256 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 SYN3O14994 580 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 GCATO75600 419 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 SPAG6O75602 509 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 CRTAMO95727 393 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 CPNE6O95741 557 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 CALCAP01258 141 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 ERBB2P04626 1255 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 SSTR1P30872 391 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 IDH3AP50213 366 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 NCOA4Q13772 614 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 ADGRE1Q14246 886 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 NOMO1Q15155 1222 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 HHATQ5VTY9 493 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 TRIM68Q6AZZ1 485 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 HMBOX1Q6NT76 420 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 LRRC52Q8N7C0 313 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 ADAMTS19Q8TE59 1207 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 TRPC4APQ8TEL6 797 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 GDPD5Q8WTR4 605 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 ARNTL2Q8WYA1 636 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 ITPKCQ96DU7 683 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 CEP295NLQ96MC4 621 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 HNRNPABQ99729 332 aaKnown RBP7.56□□□□□ -1.2
CLIP1-205ENST00000514271 TARS2Q9BW92 718 aaKnown RBP7.56□□□□□ -1.2
CLIP1-205ENST00000514271 ANKRD60Q9BZ19 345 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 KLHL4Q9C0H6 718 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 XYLT2Q9H1B5 865 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 ZNF395Q9H8N7 513 aaPredicted RBP7.56□□□□□ -1.2
CLIP1-205ENST00000514271 ANAPC7Q9UJX3 599 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 SOX13Q9UN79 622 aa7.56□□□□□ -1.2
CLIP1-205ENST00000514271 KIF26AQ9ULI4 1882 aaPredicted RBP7.56□□□□□ -1.2
CLIP1-205ENST00000514271 TCRBV3S1A0A5B6 114 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 H3BNC9 293 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 BGNP21810 368 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 GCLMP48507 274 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 SCNN1BP51168 640 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 PKDCCQ504Y2 493 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 C9orf50Q5SZB4 431 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 DDX53Q86TM3 631 aaKnown RBP7.55□□□□□ -1.2
CLIP1-205ENST00000514271 COLGALT1Q8NBJ5 622 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 TTC13Q8NBP0 860 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 GSTCDQ8NEC7 633 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 FBXL13Q8NEE6 735 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 ZSCAN18Q8TBC5 510 aaPredicted RBP7.55□□□□□ -1.2
CLIP1-205ENST00000514271 FEZF2Q8TBJ5 459 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 FBLIM1Q8WUP2 373 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 BTN2A3PQ96KV6 586 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms