RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 ZBTB26Q9HCK0 441 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 MRPL40Q9NQ50 206 aaKnown RBP15.25■□□□□ 0.03
SNF8-203ENST00000504000 UTP6Q9NYH9 597 aaKnown RBP15.25■□□□□ 0.03
SNF8-203ENST00000504000 TLK1Q9UKI8 766 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 KCNH4Q9UQ05 1017 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 TSC2P49815 1807 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 PRSS51A0A1B0GVH4 220 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 M0QYT0 321 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 KCNK1O00180 336 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 CREB3O43889 395 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 ZMPSTE24O75844 475 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 LTFP02788 710 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 TFAP2AP05549 437 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 HOXD8P13378 290 aaPredicted RBP15.24■□□□□ 0.03
SNF8-203ENST00000504000 ERCC2P18074 760 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 WARSP23381 471 aaKnown RBP15.24■□□□□ 0.03
SNF8-203ENST00000504000 GRIA4P48058 902 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 PEX6Q13608 980 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 GRIK4Q16099 956 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 UGP2Q16851 508 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 ARL13AQ5H913 290 aaPredicted RBP15.24■□□□□ 0.03
SNF8-203ENST00000504000 BORAQ6PGQ7 559 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 LINC00523Q86TU6 105 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 SPATA24Q86W54 205 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 CNTN4Q8IWV2 1026 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 TOP6BLQ8N6T0 577 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 DDI1Q8WTU0 396 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 MAELQ96JY0 434 aaKnown RBP15.24■□□□□ 0.03
SNF8-203ENST00000504000 CDRT15Q96T59 188 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 MRPS26Q9BYN8 205 aaKnown RBP15.24■□□□□ 0.03
SNF8-203ENST00000504000 ADAMTS10Q9H324 1103 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 LRRC4Q9HBW1 653 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 C20orf96Q9NUD7 363 aaPredicted RBP15.24■□□□□ 0.03
SNF8-203ENST00000504000 RRN3Q9NYV6 651 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 CDYLQ9Y232 598 aa15.24■□□□□ 0.03
SNF8-203ENST00000504000 MCM3APO60318 1980 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 CACNG3O60359 315 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 CLPTM1O96005 669 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 SBK3P0C264 359 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 KCNE1P15382 129 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 NPR3P17342 541 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 AXLP30530 894 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 TAF6P49848 677 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 THOP1P52888 689 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 GALNT2Q10471 571 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 CDH17Q12864 832 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 SLC12A1Q13621 1099 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 LAMB3Q13751 1172 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 SV2CQ496J9 727 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 ARHGAP22Q7Z5H3 698 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 SATL1Q86VE3 508 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 ZC3HC1Q86WB0 502 aaKnown RBP15.23■□□□□ 0.03
SNF8-203ENST00000504000 CCDC117Q8IWD4 279 aaPredicted RBP15.23■□□□□ 0.03
SNF8-203ENST00000504000 B3GALNT2Q8NCR0 500 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 DPF3Q92784 378 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 TOP1MTQ969P6 601 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 MFSD3Q96ES6 412 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 MLPHQ9BV36 600 aaPredicted RBP15.23■□□□□ 0.03
SNF8-203ENST00000504000 TASP1Q9H6P5 420 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 TMCO1Q9UM00 188 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 TXNDC9O14530 226 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 ZBTB24O43167 697 aaPredicted RBP15.23■□□□□ 0.03
SNF8-203ENST00000504000 NPHS1O60500 1241 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 PIGNO95427 931 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 CHRNGP07510 517 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 MPSTP25325 297 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 PMLP29590 882 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 CD68P34810 354 aaPredicted RBP15.23■□□□□ 0.03
SNF8-203ENST00000504000 DLG2Q15700 870 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 ARMC3Q5W041 872 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 NAPEPLDQ6IQ20 393 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 DRAXINQ8NBI3 349 aaPredicted RBP15.23■□□□□ 0.03
SNF8-203ENST00000504000 TEKT5Q96M29 485 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 WDR55Q9H6Y2 383 aaPredicted RBP15.23■□□□□ 0.03
SNF8-203ENST00000504000 CAB39LQ9H9S4 337 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 PIGVQ9NUD9 493 aa15.23■□□□□ 0.03
SNF8-203ENST00000504000 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.23■□□□□ 0.03
SNF8-203ENST00000504000 PDCD11Q14690 1871 aaKnown RBP15.22■□□□□ 0.03
SNF8-203ENST00000504000 OTOFQ9HC10 1997 aa15.22■□□□□ 0.03
SNF8-203ENST00000504000 RRN3P2A6NIE6 340 aa15.22■□□□□ 0.03
SNF8-203ENST00000504000 TRPC5OSA6NMA1 111 aa15.22■□□□□ 0.03
SNF8-203ENST00000504000 ACOT8O14734 319 aa15.22■□□□□ 0.03
SNF8-203ENST00000504000 SPTLC1O15269 473 aa15.22■□□□□ 0.03
SNF8-203ENST00000504000 HCRTO43612 131 aa15.22■□□□□ 0.03
SNF8-203ENST00000504000 HUS1O60921 280 aa15.22■□□□□ 0.03
SNF8-203ENST00000504000 RECQL4O94761 1208 aa15.22■□□□□ 0.03
SNF8-203ENST00000504000 CRTAMO95727 393 aa15.22■□□□□ 0.03
SNF8-203ENST00000504000 XRCC1P18887 633 aaPredicted RBP15.22■□□□□ 0.03
SNF8-203ENST00000504000 TKTP29401 623 aaKnown RBP15.22■□□□□ 0.03
SNF8-203ENST00000504000 GMPRP36959 345 aa15.22■□□□□ 0.03
SNF8-203ENST00000504000 IREB2P48200 963 aaKnown RBP15.22■□□□□ 0.03
SNF8-203ENST00000504000 PITX1P78337 314 aaPredicted RBP15.22■□□□□ 0.03
SNF8-203ENST00000504000 CEACAM7Q14002 265 aa15.22■□□□□ 0.03
SNF8-203ENST00000504000 GRM3Q14832 879 aa15.22■□□□□ 0.03
SNF8-203ENST00000504000 PABPC1LQ4VXU2 614 aaKnown RBP15.22■□□□□ 0.03
SNF8-203ENST00000504000 TMEM259Q4ZIN3 620 aa15.22■□□□□ 0.03
SNF8-203ENST00000504000 CERCAMQ5T4B2 595 aa15.22■□□□□ 0.03
SNF8-203ENST00000504000 CATSPER4Q7RTX7 472 aa15.22■□□□□ 0.03
SNF8-203ENST00000504000 GPC2Q8N158 579 aa15.22■□□□□ 0.03
SNF8-203ENST00000504000 EFCAB3Q8N7B9 438 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms