RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 USP18Q9UMW8 372 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 NCKAP1Q9Y2A7 1128 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 EP300Q09472 2414 aaPredicted RBP12.65□□□□□ -0.38
MRPL55-233ENST00000495899 GVINP1Q7Z2Y8 2422 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 GOLGA8CPA6NN73 597 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 MYO1FO00160 1098 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 CBX4O00257 560 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 MCF2LO15068 1137 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 CREB3O43889 395 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 SNAP91O60641 907 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 RAMP2O60895 175 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 LRCH4O75427 683 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 ZMPSTE24O75844 475 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 ADH1BP00325 375 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 H2AFZP0C0S5 128 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 SRCP12931 536 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 MIPP30301 263 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 PTGER3P43115 390 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 HCAR3P49019 387 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 GEMIN4P57678 1058 aaKnown RBP12.65□□□□□ -0.38
MRPL55-233ENST00000495899 YBEYP58557 167 aaPredicted RBP12.65□□□□□ -0.38
MRPL55-233ENST00000495899 ZNF33AQ06730 810 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 CST6Q15828 149 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 SYCP2LQ5T4T6 812 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 IL31Q6EBC2 164 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 PRR23CQ6ZRP0 262 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 H2AFVQ71UI9 128 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 RABEPKQ7Z6M1 372 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 UMODL1-AS1Q8N2C9 162 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 RTL3Q8N8U3 475 aaKnown RBP12.65□□□□□ -0.38
MRPL55-233ENST00000495899 ATP11CQ8NB49 1132 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 OR7D4Q8NG98 312 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 CTNNBL1Q8WYA6 563 aaPredicted RBP12.65□□□□□ -0.38
MRPL55-233ENST00000495899 CCDC114Q96M63 670 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 NUP85Q9BW27 656 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 CEP44Q9C0F1 390 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 PABPC3Q9H361 631 aaKnown RBP12.65□□□□□ -0.38
MRPL55-233ENST00000495899 NHEJ1Q9H9Q4 299 aaPredicted RBP12.65□□□□□ -0.38
MRPL55-233ENST00000495899 SGK2Q9HBY8 427 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 ATP13A1Q9HD20 1204 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 UVRAGQ9P2Y5 699 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 PCSK1NQ9UHG2 260 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 HPCAL4Q9UM19 191 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 AP4E1Q9UPM8 1137 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 CFAP54Q96N23 3096 aa12.65□□□□□ -0.38
MRPL55-233ENST00000495899 MUC22E2RYF6 1773 aaPredicted RBP12.64□□□□□ -0.39
MRPL55-233ENST00000495899 PTPRZ1P23471 2315 aaPredicted RBP12.64□□□□□ -0.39
MRPL55-233ENST00000495899 ZSCAN5CA6NGD5 496 aaPredicted RBP12.64□□□□□ -0.39
MRPL55-233ENST00000495899 METTL12A8MUP2 240 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 MT-CO1P00395 513 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 C5AR1P21730 350 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 SLC8A1P32418 973 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 ZNF75DP51815 510 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 POLD3Q15054 466 aaPredicted RBP12.64□□□□□ -0.39
MRPL55-233ENST00000495899 WDR45BQ5MNZ6 344 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 FAM46CQ5VWP2 391 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 PEAR1Q5VY43 1037 aaPredicted RBP12.64□□□□□ -0.39
MRPL55-233ENST00000495899 CYP4V2Q6ZWL3 525 aaPredicted RBP12.64□□□□□ -0.39
MRPL55-233ENST00000495899 GAS2L3Q86XJ1 694 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 MMAAQ8IVH4 418 aaKnown RBP12.64□□□□□ -0.39
MRPL55-233ENST00000495899 STK40Q8N2I9 435 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 C12orf50Q8NA57 414 aaPredicted RBP12.64□□□□□ -0.39
MRPL55-233ENST00000495899 CEP76Q8TAP6 659 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 OR8D1Q8WZ84 308 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 ARHGEF2Q92974 986 aaKnown RBP12.64□□□□□ -0.39
MRPL55-233ENST00000495899 PEBP4Q96S96 227 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 CHP1Q99653 195 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 SNRNP25Q9BV90 132 aaKnown RBP12.64□□□□□ -0.39
MRPL55-233ENST00000495899 GPR174Q9BXC1 333 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 BTBD1Q9H0C5 482 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 DHX35Q9H5Z1 703 aaKnown RBP12.64□□□□□ -0.39
MRPL55-233ENST00000495899 CD93Q9NPY3 652 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 NDFIP2Q9NV92 336 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 DNAI1Q9UI46 699 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 ANAPC7Q9UJX3 599 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 PILRBQ9UKJ0 227 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 PPM1HQ9ULR3 514 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 FZD4Q9ULV1 537 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 MYO18AQ92614 2054 aaKnown RBP12.64□□□□□ -0.39
MRPL55-233ENST00000495899 FAM186AA6NE01 2351 aa12.64□□□□□ -0.39
MRPL55-233ENST00000495899 KHNYNO15037 678 aaKnown RBP12.63□□□□□ -0.39
MRPL55-233ENST00000495899 KDELR3O43731 214 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 IL1BP01584 269 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 TMEM253P0C7T8 217 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 VAV1P15498 845 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 GOT1P17174 413 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 ITPKAP23677 461 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 ACVRL1P37023 503 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 NUMBP49757 651 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 SERPINH1P50454 418 aaKnown RBP12.63□□□□□ -0.39
MRPL55-233ENST00000495899 NDST2P52849 883 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 TPI1P60174 286 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 PARP15Q460N3 678 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 LINGO4Q6UY18 593 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 SLC41A1Q8IVJ1 513 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 TC2NQ8N9U0 490 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 TMIEQ8NEW7 156 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 OR2A12Q8NGT7 310 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 TEKT4Q8WW24 435 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 CASKIN2Q8WXE0 1202 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms