RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 OPA1O60313 960 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 SNAP91O60641 907 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 HSF2BPO75031 334 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 PAGE1O75459 146 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 CLDN11O75508 207 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 PIAS2O75928 621 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 MT-CO1P00395 513 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 MPOP05164 745 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 GLI1P08151 1106 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 GIMD1P0DJR0 217 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 ALPPL2P10696 532 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 CKMT1AP12532 417 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 HNRNPA2B1P22626 353 aaKnown RBP12.64□□□□□ -0.39
SAMM50-205ENST00000493621 AKT2P31751 481 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 CHRNA3P32297 505 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 USP8P40818 1118 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 PCBP4P57723 403 aaKnown RBP12.64□□□□□ -0.39
SAMM50-205ENST00000493621 CLDN2P57739 230 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 GABREP78334 506 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 ZNF284Q2VY69 593 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 CDCP2Q5VXM1 449 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 NEK5Q6P3R8 708 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 GJB7Q6PEY0 223 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 PCSK4Q6UW60 755 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 HORMAD1Q86X24 394 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 PASD1Q8IV76 773 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 WDTC1Q8N5D0 677 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 ATP11CQ8NB49 1132 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 ZNF248Q8NDW4 579 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 PPP1R13BQ96KQ4 1090 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 CCDC114Q96M63 670 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 TIGD1Q96MW7 591 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 NOX5Q96PH1 765 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 CPXM1Q96SM3 734 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 PSMB7Q99436 277 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 SIK2Q9H0K1 926 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 DYRK4Q9NR20 520 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 ASNSD1Q9NWL6 643 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 TBC1D30Q9Y2I9 924 aa12.64□□□□□ -0.39
SAMM50-205ENST00000493621 DOCK4Q8N1I0 1966 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 BICDL2A1A5D9 508 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 K7ERQ8 282 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 RNF103O00237 685 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 USP12O75317 370 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 CSO75390 466 aaKnown RBP12.63□□□□□ -0.39
SAMM50-205ENST00000493621 CNTN5O94779 1100 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 PCDH8O95206 1070 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 GNA14O95837 355 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 RHOCP08134 193 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 RRM1P23921 792 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 CDH4P55283 916 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 STX17P56962 302 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 KRT83P78385 493 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 CFHR1Q03591 330 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 CCDC15Q0P6D6 951 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 ARHGAP44Q17R89 818 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 ZNF542PQ5EBM4 170 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 BROXQ5VW32 411 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 SEL1L3Q68CR1 1132 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 OR6B2Q6IFH4 312 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 GCNT7Q6ZNI0 430 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 FAM183BPQ6ZVS7 135 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 SLC22A18ASQ8N1D0 253 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 CHST14Q8NCH0 376 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 TMIEQ8NEW7 156 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 OR2A12Q8NGT7 310 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 APOLD1Q96LR9 279 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 ZNF578Q96N58 590 aaPredicted RBP12.63□□□□□ -0.39
SAMM50-205ENST00000493621 DEPDC7Q96QD5 511 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 OSBPL2Q9H1P3 480 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 CPNE5Q9HCH3 593 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 NLGN3Q9NZ94 848 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 VPS51Q9UID3 782 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 ZFR2Q9UPR6 939 aaKnown RBP12.63□□□□□ -0.39
SAMM50-205ENST00000493621 HS3ST2Q9Y278 367 aa12.63□□□□□ -0.39
SAMM50-205ENST00000493621 COL27A1Q8IZC6 1860 aaPredicted RBP12.62□□□□□ -0.39
SAMM50-205ENST00000493621 BECN2A8MW95 431 aa12.62□□□□□ -0.39
SAMM50-205ENST00000493621 M0QYT0 321 aa12.62□□□□□ -0.39
SAMM50-205ENST00000493621 ERVH48-1M5A8F1 160 aa12.62□□□□□ -0.39
SAMM50-205ENST00000493621 SMAD6O43541 496 aaKnown RBP12.62□□□□□ -0.39
SAMM50-205ENST00000493621 DAB1O75553 588 aa12.62□□□□□ -0.39
SAMM50-205ENST00000493621 NEBLO76041 1014 aa12.62□□□□□ -0.39
SAMM50-205ENST00000493621 PRNPP04156 253 aa12.62□□□□□ -0.39
SAMM50-205ENST00000493621 BMP6P22004 513 aa12.62□□□□□ -0.39
SAMM50-205ENST00000493621 MARSP56192 900 aaKnown RBP12.62□□□□□ -0.39
SAMM50-205ENST00000493621 TMPRSS3P57727 454 aa12.62□□□□□ -0.39
SAMM50-205ENST00000493621 MTA1Q13330 715 aa12.62□□□□□ -0.39
SAMM50-205ENST00000493621 C5orf22Q49AR2 442 aa12.62□□□□□ -0.39
SAMM50-205ENST00000493621 ALFQ53S48 1182 aa12.62□□□□□ -0.39
SAMM50-205ENST00000493621 TAF1BQ53T94 588 aaPredicted RBP12.62□□□□□ -0.39
SAMM50-205ENST00000493621 ARSIQ5FYB1 569 aa12.62□□□□□ -0.39
SAMM50-205ENST00000493621 FOXR2Q6PJQ5 311 aa12.62□□□□□ -0.39
SAMM50-205ENST00000493621 OLFML1Q6UWY5 402 aa12.62□□□□□ -0.39
SAMM50-205ENST00000493621 LINGO4Q6UY18 593 aa12.62□□□□□ -0.39
SAMM50-205ENST00000493621 Q6ZSR6 202 aa12.62□□□□□ -0.39
SAMM50-205ENST00000493621 C11orf57Q6ZUT1 292 aaPredicted RBP12.62□□□□□ -0.39
SAMM50-205ENST00000493621 ERN2Q76MJ5 926 aaKnown RBP12.62□□□□□ -0.39
SAMM50-205ENST00000493621 ENOSF1Q7L5Y1 443 aa12.62□□□□□ -0.39
SAMM50-205ENST00000493621 PTAR1Q7Z6K3 402 aaPredicted RBP12.62□□□□□ -0.39
SAMM50-205ENST00000493621 LSMEM2Q8N112 164 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms