RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.12■□□□□ 0.49
NUP50-218ENST00000493456 A6NNZ2 444 aa18.12■□□□□ 0.49
NUP50-218ENST00000493456 E5RJQ4 531 aa18.12■□□□□ 0.49
NUP50-218ENST00000493456 K7ESM1 405 aa18.12■□□□□ 0.49
NUP50-218ENST00000493456 P4HA2O15460 535 aa18.12■□□□□ 0.49
NUP50-218ENST00000493456 CALCAP01258 141 aa18.12■□□□□ 0.49
NUP50-218ENST00000493456 RBMS1P29558 406 aaKnown RBP18.12■□□□□ 0.49
NUP50-218ENST00000493456 KCNC4Q03721 635 aa18.12■□□□□ 0.49
NUP50-218ENST00000493456 ZNF177Q13360 481 aaPredicted RBP18.12■□□□□ 0.49
NUP50-218ENST00000493456 ISXQ2M1V0 245 aa18.12■□□□□ 0.49
NUP50-218ENST00000493456 ZCCHC8Q6NZY4 707 aaKnown RBP18.12■□□□□ 0.49
NUP50-218ENST00000493456 GCNT7Q6ZNI0 430 aa18.12■□□□□ 0.49
NUP50-218ENST00000493456 TMEM110Q86TL2 294 aa18.12■□□□□ 0.49
NUP50-218ENST00000493456 SLC22A18ASQ8N1D0 253 aa18.12■□□□□ 0.49
NUP50-218ENST00000493456 TMIEQ8NEW7 156 aa18.12■□□□□ 0.49
NUP50-218ENST00000493456 KLK6Q92876 244 aa18.12■□□□□ 0.49
NUP50-218ENST00000493456 MED8Q96G25 268 aa18.12■□□□□ 0.49
NUP50-218ENST00000493456 GOLPH3LQ9H4A5 285 aa18.12■□□□□ 0.49
NUP50-218ENST00000493456 FZD3Q9NPG1 666 aa18.12■□□□□ 0.49
NUP50-218ENST00000493456 SATB2Q9UPW6 733 aa18.12■□□□□ 0.49
NUP50-218ENST00000493456 OR51B4Q9Y5P0 310 aa18.12■□□□□ 0.49
NUP50-218ENST00000493456 DOCK9Q9BZ29 2069 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 COL12A1Q99715 3063 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 K7ENP7 123 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 KPNA3O00505 521 aaPredicted RBP18.11■□□□□ 0.49
NUP50-218ENST00000493456 MED7O43513 233 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 BNIP3LO60238 219 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 CLDN11O75508 207 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 CTSLP07711 333 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 PMS1P54277 932 aaKnown RBP18.11■□□□□ 0.49
NUP50-218ENST00000493456 KRT83P78385 493 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 SKOR1P84550 965 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 CDK17Q00537 523 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 CENPCQ03188 943 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 C3orf38Q5JPI3 329 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 INO80CQ6PI98 192 aaPredicted RBP18.11■□□□□ 0.49
NUP50-218ENST00000493456 RRAGAQ7L523 313 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 LMO3Q8TAP4 145 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 SLC46A1Q96NT5 459 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 GSDMAQ96QA5 445 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 GTPBP4Q9BZE4 634 aaKnown RBP18.11■□□□□ 0.49
NUP50-218ENST00000493456 SCAND2PQ9GZW5 306 aaPredicted RBP18.11■□□□□ 0.49
NUP50-218ENST00000493456 OSBPL2Q9H1P3 480 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 GPR27Q9NS67 375 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 DDIT4Q9NX09 232 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 DNAJC28Q9NX36 388 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 CNTN6Q9UQ52 1028 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 PCDHGA8Q9Y5G5 932 aa18.11■□□□□ 0.49
NUP50-218ENST00000493456 BSNQ9UPA5 3926 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 H3BM21 787 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 PRNPP04156 253 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 GLI1P08151 1106 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 SRCP12931 536 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 MYF5P13349 255 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 CHRNA3P32297 505 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 PITX1P78337 314 aaPredicted RBP18.1■□□□□ 0.49
NUP50-218ENST00000493456 PNOCQ13519 176 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 AUHQ13825 339 aaKnown RBP18.1■□□□□ 0.49
NUP50-218ENST00000493456 TMEM259Q4ZIN3 620 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 DENND1BQ6P3S1 775 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 KYAT3Q6YP21 454 aaKnown RBP18.1■□□□□ 0.49
NUP50-218ENST00000493456 Q6ZSR6 202 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 ERN2Q76MJ5 926 aaKnown RBP18.1■□□□□ 0.49
NUP50-218ENST00000493456 PTAR1Q7Z6K3 402 aaPredicted RBP18.1■□□□□ 0.49
NUP50-218ENST00000493456 ZNF548Q8NEK5 533 aaPredicted RBP18.1■□□□□ 0.49
NUP50-218ENST00000493456 OR52K2Q8NGK3 314 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 OR2A12Q8NGT7 310 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 TPCN2Q8NHX9 752 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 PPP1R16AQ96I34 528 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 CEP63Q96MT8 703 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 NOX5Q96PH1 765 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 C2orf49Q9BVC5 232 aaPredicted RBP18.1■□□□□ 0.49
NUP50-218ENST00000493456 HDAC8Q9BY41 377 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 MUC3BQ9H195 1237 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 VANGL2Q9ULK5 521 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 ZFR2Q9UPR6 939 aaKnown RBP18.1■□□□□ 0.49
NUP50-218ENST00000493456 TBC1D30Q9Y2I9 924 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 HS3ST3A1Q9Y663 406 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 CSNK1G3Q9Y6M4 447 aa18.1■□□□□ 0.49
NUP50-218ENST00000493456 TRIM49BA6NDI0 452 aa18.09■□□□□ 0.49
NUP50-218ENST00000493456 PCDH8O95206 1070 aa18.09■□□□□ 0.49
NUP50-218ENST00000493456 NME1P15531 152 aaKnown RBP18.09■□□□□ 0.49
NUP50-218ENST00000493456 TGM2P21980 687 aa18.09■□□□□ 0.49
NUP50-218ENST00000493456 MLLT3P42568 568 aaPredicted RBP18.09■□□□□ 0.49
NUP50-218ENST00000493456 CDH4P55283 916 aa18.09■□□□□ 0.49
NUP50-218ENST00000493456 CLDN2P57739 230 aa18.09■□□□□ 0.49
NUP50-218ENST00000493456 CCDC40Q4G0X9 1142 aa18.09■□□□□ 0.49
NUP50-218ENST00000493456 PARGQ86W56 976 aa18.09■□□□□ 0.49
NUP50-218ENST00000493456 ATP11CQ8NB49 1132 aa18.09■□□□□ 0.49
NUP50-218ENST00000493456 ARRDC3Q96B67 414 aa18.09■□□□□ 0.49
NUP50-218ENST00000493456 SLC2A13Q96QE2 648 aa18.09■□□□□ 0.49
NUP50-218ENST00000493456 SRRTQ9BXP5 876 aaKnown RBP18.09■□□□□ 0.49
NUP50-218ENST00000493456 ASNSD1Q9NWL6 643 aa18.09■□□□□ 0.49
NUP50-218ENST00000493456 UBR5O95071 2799 aaPredicted RBP18.09■□□□□ 0.49
NUP50-218ENST00000493456 SPTA1P02549 2419 aa18.09■□□□□ 0.49
NUP50-218ENST00000493456 ARHGAP6O43182 974 aa18.08■□□□□ 0.48
NUP50-218ENST00000493456 SLC28A2O43868 658 aa18.08■□□□□ 0.48
NUP50-218ENST00000493456 TCEA3O75764 348 aa18.08■□□□□ 0.48
NUP50-218ENST00000493456 NEBLO76041 1014 aa18.08■□□□□ 0.48
NUP50-218ENST00000493456 WISP1O95388 367 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms