RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 NME3Q13232 169 aa17.4■□□□□ 0.38
TOP3B-217ENST00000489581 ZNF284Q2VY69 593 aa17.4■□□□□ 0.38
TOP3B-217ENST00000489581 HORMAD1Q86X24 394 aa17.4■□□□□ 0.38
TOP3B-217ENST00000489581 TRIM59Q8IWR1 403 aa17.4■□□□□ 0.38
TOP3B-217ENST00000489581 ZNF248Q8NDW4 579 aa17.4■□□□□ 0.38
TOP3B-217ENST00000489581 NELFBQ8WX92 580 aa17.4■□□□□ 0.38
TOP3B-217ENST00000489581 ARRDC3Q96B67 414 aa17.4■□□□□ 0.38
TOP3B-217ENST00000489581 NOX5Q96PH1 765 aa17.4■□□□□ 0.38
TOP3B-217ENST00000489581 CPXM1Q96SM3 734 aa17.4■□□□□ 0.38
TOP3B-217ENST00000489581 SIK2Q9H0K1 926 aa17.4■□□□□ 0.38
TOP3B-217ENST00000489581 OSBPL2Q9H1P3 480 aa17.4■□□□□ 0.38
TOP3B-217ENST00000489581 ATMQ13315 3056 aa17.4■□□□□ 0.38
TOP3B-217ENST00000489581 DOCK4Q8N1I0 1966 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 K7ERQ8 282 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 RNF103O00237 685 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 CLDN11O75508 207 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 CNTN5O94779 1100 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 PCDH8O95206 1070 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 AFPP02771 609 aaKnown RBP17.39■□□□□ 0.37
TOP3B-217ENST00000489581 GIMD1P0DJR0 217 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 CKMT1AP12532 417 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 HNRNPA2B1P22626 353 aaKnown RBP17.39■□□□□ 0.37
TOP3B-217ENST00000489581 STX17P56962 302 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 PCBP4P57723 403 aaKnown RBP17.39■□□□□ 0.37
TOP3B-217ENST00000489581 GABREP78334 506 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 CFHR1Q03591 330 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 TAF1BQ53T94 588 aaPredicted RBP17.39■□□□□ 0.37
TOP3B-217ENST00000489581 ZNF542PQ5EBM4 170 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 CDCP2Q5VXM1 449 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 NEK5Q6P3R8 708 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 GJB7Q6PEY0 223 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 WDTC1Q8N5D0 677 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 ATP11CQ8NB49 1132 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 OR2A12Q8NGT7 310 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 COL26A1Q96A83 441 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 APOLD1Q96LR9 279 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 ZNF578Q96N58 590 aaPredicted RBP17.39■□□□□ 0.37
TOP3B-217ENST00000489581 PSMB7Q99436 277 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 HOOK1Q9UJC3 728 aaKnown RBP17.39■□□□□ 0.37
TOP3B-217ENST00000489581 ZFR2Q9UPR6 939 aaKnown RBP17.39■□□□□ 0.37
TOP3B-217ENST00000489581 CTNND2Q9UQB3 1225 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 TBC1D30Q9Y2I9 924 aa17.39■□□□□ 0.37
TOP3B-217ENST00000489581 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.39■□□□□ 0.37
TOP3B-217ENST00000489581 PPP1R3GB7ZBB8 358 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 USP12O75317 370 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 PAGE1O75459 146 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 GLI1P08151 1106 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 BMP6P22004 513 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 RRM1P23921 792 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 USP8P40818 1118 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 PPP1R2P41236 205 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 CDH4P55283 916 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 KRT83P78385 493 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 EFHC1Q5JVL4 640 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 ARHGAP40Q5TG30 622 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 OR6B2Q6IFH4 312 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 PASD1Q8IV76 773 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 SLC22A18ASQ8N1D0 253 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 CHST14Q8NCH0 376 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 TMIEQ8NEW7 156 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 HIC2Q96JB3 615 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 PPP1R13BQ96KQ4 1090 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 DEPDC7Q96QD5 511 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 CRACR2AQ9BSW2 395 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 CPNE5Q9HCH3 593 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 DYRK4Q9NR20 520 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 ASNSD1Q9NWL6 643 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 VPS51Q9UID3 782 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 HS3ST2Q9Y278 367 aa17.38■□□□□ 0.37
TOP3B-217ENST00000489581 LY6G6EA0A0G2JKS1 128 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 BICDL2A1A5D9 508 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 BECN2A8MW95 431 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 ERVH48-1M5A8F1 160 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 SMAD6O43541 496 aaKnown RBP17.37■□□□□ 0.37
TOP3B-217ENST00000489581 HSF2BPO75031 334 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 CSO75390 466 aaKnown RBP17.37■□□□□ 0.37
TOP3B-217ENST00000489581 NEBLO76041 1014 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 RHOCP08134 193 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 ALPPL2P10696 532 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 CCDC15Q0P6D6 951 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 ARHGAP44Q17R89 818 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 ALFQ53S48 1182 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 ARSIQ5FYB1 569 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 BROXQ5VW32 411 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 SEL1L3Q68CR1 1132 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 LINGO4Q6UY18 593 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 GCNT7Q6ZNI0 430 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 Q6ZSR6 202 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 FAM183BPQ6ZVS7 135 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 ERN2Q76MJ5 926 aaKnown RBP17.37■□□□□ 0.37
TOP3B-217ENST00000489581 PTAR1Q7Z6K3 402 aaPredicted RBP17.37■□□□□ 0.37
TOP3B-217ENST00000489581 ABI3BPQ7Z7G0 1075 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 GRIN3AQ8TCU5 1115 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 CCDC114Q96M63 670 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 TIGD1Q96MW7 591 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 SRRTQ9BXP5 876 aaKnown RBP17.37■□□□□ 0.37
TOP3B-217ENST00000489581 ABCG4Q9H172 646 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 DNAJC28Q9NX36 388 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 NLGN3Q9NZ94 848 aa17.37■□□□□ 0.37
TOP3B-217ENST00000489581 SNX10Q9Y5X0 201 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms