RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 LRRC40Q9H9A6 602 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 ACOT9Q9Y305 439 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 WASF2Q9Y6W5 498 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 BIVM-ERCC5R4GMW8 1640 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 C2orf71A6NGG8 1288 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 IL1R1P14778 569 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 AMPD1P23109 780 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 BNIP2Q12982 314 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 CXXC5Q7LFL8 322 aaKnown RBP10.39□□□□□ -0.75
COL12A1-207ENST00000483888 OFCC1Q8IZS5 231 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 GOLM1Q8NBJ4 401 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 TNFAIP8L1Q8WVP5 186 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 RAD18Q9NS91 495 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 TDP2O95551 362 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 NUDT17P0C025 328 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 IL2RBP14784 551 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 ARHGAP15Q53QZ3 475 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 C11orf96Q7Z7L8 435 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 DNAJB14Q8TBM8 379 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 SLC9A6Q92581 669 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 REEP2Q9BRK0 252 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 LXNQ9BS40 222 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 HERC2P3Q9BVR0 1158 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 AASSQ9UDR5 926 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 A0A0B4J269 797 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 KBTBD13C9JR72 458 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 PGRP06401 933 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 RARBP10826 455 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 BNIP3Q12983 259 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 TUBB3Q13509 450 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 CDH18Q13634 790 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 CDKAL1Q5VV42 579 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 HIPK3Q9H422 1215 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 NEK6Q9HC98 313 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 NDUFAF4Q9P032 175 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 XPR1Q9UBH6 696 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 FAM205CA6NFA0 338 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 A8MV72 311 aaPredicted RBP10.39□□□□□ -0.75
COL12A1-207ENST00000483888 EFCAB9A8MZ26 197 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 KCNQ3O43525 872 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 AIREO43918 545 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 MAP3K6O95382 1288 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 SLC2A4P14672 509 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 CD40LGP29965 261 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 ARHGDIBP52566 201 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 MYBPC3Q14896 1274 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 BTBD16Q32M84 506 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 ERAP2Q6P179 960 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 SHQ1Q6PI26 577 aaKnown RBP10.39□□□□□ -0.75
COL12A1-207ENST00000483888 CYP2U1Q7Z449 544 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 GMIPQ9P107 970 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 EGFL7Q9UHF1 273 aa10.39□□□□□ -0.75
COL12A1-207ENST00000483888 TCOF1Q13428 1488 aaKnown RBP10.38□□□□□ -0.75
COL12A1-207ENST00000483888 ZBTB24O43167 697 aaPredicted RBP10.38□□□□□ -0.75
COL12A1-207ENST00000483888 ST3GAL1Q11201 340 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 WDR48Q8TAF3 677 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 FNDC8Q8TC99 324 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 AP1S3Q96PC3 154 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 AIFM2Q9BRQ8 373 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 DPY30Q9C005 99 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 AS3MTQ9HBK9 375 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 PLK2Q9NYY3 685 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 GPATCH8Q9UKJ3 1502 aaKnown RBP10.38□□□□□ -0.75
COL12A1-207ENST00000483888 NMT2O60551 498 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 GPD1P21695 349 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 SNRNP35Q16560 246 aaKnown RBP10.38□□□□□ -0.75
COL12A1-207ENST00000483888 COLEC12Q5KU26 742 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 VWA5B1Q5TIE3 1220 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 USP43Q70EL4 1123 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 SLC47A1Q96FL8 570 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 CPNE1Q99829 537 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 HSPB11Q9Y547 144 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 KCNK1O00180 336 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 RBL1P28749 1068 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 MAB21L1Q13394 359 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 STOX1Q6ZVD7 989 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 AADATQ8N5Z0 425 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 MCOLN3Q8TDD5 553 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 TREM1Q9NP99 234 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 TRPM5Q9NZQ8 1165 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 MTRRQ9UBK8 725 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 PADI4Q9UM07 663 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 MGAT4DA6NG13 374 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 PLK4O00444 970 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 TPP1O14773 563 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 SERPINA3P01011 423 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 RGS7P49802 495 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 ANXA11P50995 505 aaKnown RBP10.38□□□□□ -0.75
COL12A1-207ENST00000483888 DNAAF5Q86Y56 855 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 DSELQ8IZU8 1212 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 HM13Q8TCT9 377 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 STRBPQ96SI9 672 aaKnown RBP10.38□□□□□ -0.75
COL12A1-207ENST00000483888 POMKQ9H5K3 350 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 MID1IP1Q9NPA3 183 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 NKX1-2Q9UD57 310 aaPredicted RBP10.38□□□□□ -0.75
COL12A1-207ENST00000483888 EIF3DO15371 548 aaKnown RBP eCLIP10.38□□□□□ -0.75
COL12A1-207ENST00000483888 CCNB1P14635 433 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 PDIA5Q14554 519 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 METTL21CQ5VZV1 264 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 TTC39CQ8N584 583 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms