RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 WDCPQ9H6R7 721 aa17.13■□□□□ 0.33
TRIM13-208ENST00000478111 TMPRSS4Q9NRS4 437 aa17.13■□□□□ 0.33
TRIM13-208ENST00000478111 VPS51Q9UID3 782 aa17.13■□□□□ 0.33
TRIM13-208ENST00000478111 PRAMEF26H0Y7S4 382 aa17.12■□□□□ 0.33
TRIM13-208ENST00000478111 BNIP3LO60238 219 aa17.12■□□□□ 0.33
TRIM13-208ENST00000478111 RNGTTO60942 597 aaKnown RBP17.12■□□□□ 0.33
TRIM13-208ENST00000478111 ZNF18P17022 549 aa17.12■□□□□ 0.33
TRIM13-208ENST00000478111 CDH5P33151 784 aaPredicted RBP17.12■□□□□ 0.33
TRIM13-208ENST00000478111 MTIF2P46199 727 aaKnown RBP17.12■□□□□ 0.33
TRIM13-208ENST00000478111 GABRB2P47870 512 aa17.12■□□□□ 0.33
TRIM13-208ENST00000478111 TARDBPQ13148 414 aaKnown RBP eCLIP17.12■□□□□ 0.33
TRIM13-208ENST00000478111 STAT4Q14765 748 aa17.12■□□□□ 0.33
TRIM13-208ENST00000478111 PROX2Q3B8N5 592 aa17.12■□□□□ 0.33
TRIM13-208ENST00000478111 SETMARQ53H47 684 aaPredicted RBP17.12■□□□□ 0.33
TRIM13-208ENST00000478111 BRMS1LQ5PSV4 323 aa17.12■□□□□ 0.33
TRIM13-208ENST00000478111 HES3Q5TGS1 186 aa17.12■□□□□ 0.33
TRIM13-208ENST00000478111 ZDHHC17Q8IUH5 632 aa17.12■□□□□ 0.33
TRIM13-208ENST00000478111 SLC25A45Q8N413 288 aa17.12■□□□□ 0.33
TRIM13-208ENST00000478111 ARRDC3Q96B67 414 aa17.12■□□□□ 0.33
TRIM13-208ENST00000478111 MUC3BQ9H195 1237 aa17.12■□□□□ 0.33
TRIM13-208ENST00000478111 PREBQ9HCU5 417 aa17.12■□□□□ 0.33
TRIM13-208ENST00000478111 RRN3Q9NYV6 651 aa17.12■□□□□ 0.33
TRIM13-208ENST00000478111 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.12■□□□□ 0.335e-8■■□□□ 12
TRIM13-208ENST00000478111 ATMQ13315 3056 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 IGLV3-10A0A075B6K4 115 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 A0A0D9SEW6 157 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 MAGEC1O60732 1142 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 ZNF821O75541 412 aaPredicted RBP17.11■□□□□ 0.33
TRIM13-208ENST00000478111 RHOCP08134 193 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 CKMT2P17540 419 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 RRM1P23921 792 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 CHRNA3P32297 505 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 HNF1BP35680 557 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 SULT1E1P49888 294 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 SNX16P57768 344 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 RNASE9P60153 205 aaKnown RBP17.11■□□□□ 0.33
TRIM13-208ENST00000478111 KRT83P78385 493 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 KCNMA1Q12791 1236 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 ILKQ13418 452 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 MAN2A1Q16706 1144 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 ZNF284Q2VY69 593 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 MIIPQ5JXC2 388 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 TRNP1Q6NT89 227 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 BNIPLQ7Z465 357 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 ATP11CQ8NB49 1132 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 CHST14Q8NCH0 376 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 TMIEQ8NEW7 156 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 KLK6Q92876 244 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 KLHDC7BQ96G42 594 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 C1orf74Q96LT6 269 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 TBCBQ99426 244 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 SYNCQ9H7C4 482 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 CAAP1Q9H8G2 361 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 MPP6Q9NZW5 540 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 ZNF212Q9UDV6 495 aa17.11■□□□□ 0.33
TRIM13-208ENST00000478111 A0A1W2PQU0 124 aa17.1■□□□□ 0.33
TRIM13-208ENST00000478111 TRIM38O00635 465 aa17.1■□□□□ 0.33
TRIM13-208ENST00000478111 SLC31A1O15431 190 aa17.1■□□□□ 0.33
TRIM13-208ENST00000478111 TLX3O43711 291 aaPredicted RBP17.1■□□□□ 0.33
TRIM13-208ENST00000478111 SDC3O75056 442 aa17.1■□□□□ 0.33
TRIM13-208ENST00000478111 PRLRP16471 622 aa17.1■□□□□ 0.33
TRIM13-208ENST00000478111 GLDCP23378 1020 aa17.1■□□□□ 0.33
TRIM13-208ENST00000478111 ACP1P24666 158 aa17.1■□□□□ 0.33
TRIM13-208ENST00000478111 SCNN1AP37088 669 aa17.1■□□□□ 0.33
TRIM13-208ENST00000478111 SLC25A52Q3SY17 297 aa17.1■□□□□ 0.33
TRIM13-208ENST00000478111 C6orf118Q5T5N4 469 aa17.1■□□□□ 0.33
TRIM13-208ENST00000478111 NEK5Q6P3R8 708 aa17.1■□□□□ 0.33
TRIM13-208ENST00000478111 LINGO4Q6UY18 593 aa17.1■□□□□ 0.33
TRIM13-208ENST00000478111 SETD3Q86TU7 594 aaPredicted RBP17.1■□□□□ 0.33
TRIM13-208ENST00000478111 XYLT1Q86Y38 959 aa17.1■□□□□ 0.33
TRIM13-208ENST00000478111 DCAF4L2Q8NA75 395 aa17.1■□□□□ 0.33
TRIM13-208ENST00000478111 MLKLQ8NB16 471 aa17.1■□□□□ 0.33
TRIM13-208ENST00000478111 RFFLQ8WZ73 363 aa17.1■□□□□ 0.33
TRIM13-208ENST00000478111 C2orf49Q9BVC5 232 aaPredicted RBP17.1■□□□□ 0.33
TRIM13-208ENST00000478111 NDST4Q9H3R1 872 aa17.1■□□□□ 0.33
TRIM13-208ENST00000478111 STAP1Q9ULZ2 295 aa17.1■□□□□ 0.33
TRIM13-208ENST00000478111 KPNA3O00505 521 aaPredicted RBP17.09■□□□□ 0.33
TRIM13-208ENST00000478111 SIGLEC6O43699 453 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 ZMPSTE24O75844 475 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 F9P00740 461 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 THEGLP0DJG4 465 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 GIMD1P0DJR0 217 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 CYP11B1P15538 503 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 FLT3P36888 993 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 BPIFB4P59827 614 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 UBE2HP62256 183 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 DEUP1Q05D60 604 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 DRAP1Q14919 205 aaPredicted RBP17.09■□□□□ 0.33
TRIM13-208ENST00000478111 RTP5Q14D33 572 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 VWA3BQ502W6 1294 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 C2CD6Q53TS8 623 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 TFAP2DQ7Z6R9 452 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 HORMAD1Q86X24 394 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 CACTIN-AS1Q8N1I8 211 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 TMEM35BQ8NCS4 154 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 OR7D4Q8NG98 312 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 NXPE2Q96DL1 559 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 C18orf8Q96DM3 657 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 MYOCQ99972 504 aa17.09■□□□□ 0.33
TRIM13-208ENST00000478111 NAA15Q9BXJ9 866 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms