RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 EPAS1Q99814 870 aa10.54□□□□□ -0.72
CDHR3-209ENST00000472116 NT5C1AQ9BXI3 368 aa10.54□□□□□ -0.72
CDHR3-209ENST00000472116 DUSP16Q9BY84 665 aa10.54□□□□□ -0.72
CDHR3-209ENST00000472116 INTS2Q9H0H0 1204 aaKnown RBP10.54□□□□□ -0.72
CDHR3-209ENST00000472116 SDCBP2Q9H190 292 aa10.54□□□□□ -0.72
CDHR3-209ENST00000472116 CAAP1Q9H8G2 361 aa10.54□□□□□ -0.72
CDHR3-209ENST00000472116 STK17AQ9UEE5 414 aa10.54□□□□□ -0.72
CDHR3-209ENST00000472116 CCDC39Q9UFE4 941 aa10.54□□□□□ -0.72
CDHR3-209ENST00000472116 HMGXB4Q9UGU5 601 aa10.54□□□□□ -0.72
CDHR3-209ENST00000472116 APOBEC3BQ9UH17 382 aaKnown RBP10.54□□□□□ -0.72
CDHR3-209ENST00000472116 INTS6Q9UL03 887 aaKnown RBP10.54□□□□□ -0.72
CDHR3-209ENST00000472116 PHTF1Q9UMS5 762 aa10.54□□□□□ -0.72
CDHR3-209ENST00000472116 TP53TG5Q9Y2B4 290 aa10.54□□□□□ -0.72
CDHR3-209ENST00000472116 HS3ST3A1Q9Y663 406 aa10.54□□□□□ -0.72
CDHR3-209ENST00000472116 ZNF106Q9H2Y7 1883 aaKnown RBP10.53□□□□□ -0.72
CDHR3-209ENST00000472116 C9orf172C9J069 976 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 LMO7DNF2Z398 122 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 MKRN2OSH3BPM6 223 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 M0QYT0 321 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 CASC3O15234 703 aaKnown RBP10.53□□□□□ -0.72
CDHR3-209ENST00000472116 ALOX15BO15296 676 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 RNF224P0DH78 156 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 PRKAR1AP10644 381 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 LONP1P36776 959 aaKnown RBP10.53□□□□□ -0.72
CDHR3-209ENST00000472116 ETV5P41161 510 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 METAP1P53582 386 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 ANAPC15P60006 121 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 CCL7P80098 99 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 SULT2A1Q06520 285 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 CYP24A1Q07973 514 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 ZNF284Q2VY69 593 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 PHF19Q5T6S3 580 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 SV2BQ7L1I2 683 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 ARL10Q8N8L6 244 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 OR6C4Q8NGE1 309 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 CPT1CQ8TCG5 803 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 NKD1Q969G9 470 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 EFHD1Q9BUP0 239 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 SLC13A1Q9BZW2 595 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 CDH19Q9H159 772 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 LRRN3Q9H3W5 708 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 SFMBT1Q9UHJ3 866 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 SLC25A13Q9UJS0 675 aa10.53□□□□□ -0.72
CDHR3-209ENST00000472116 FPGTO14772 594 aa10.52□□□□□ -0.73
CDHR3-209ENST00000472116 BNIP3LO60238 219 aa10.52□□□□□ -0.73
CDHR3-209ENST00000472116 LUC7L3O95232 432 aaKnown RBP10.52□□□□□ -0.73
CDHR3-209ENST00000472116 RECQLP46063 649 aaPredicted RBP10.52□□□□□ -0.73
CDHR3-209ENST00000472116 STK19P49842 368 aaPredicted RBP10.52□□□□□ -0.73
CDHR3-209ENST00000472116 CYP2J2P51589 502 aa10.52□□□□□ -0.73
CDHR3-209ENST00000472116 THOP1P52888 689 aa10.52□□□□□ -0.73
CDHR3-209ENST00000472116 MC1RQ01726 317 aa10.52□□□□□ -0.73
CDHR3-209ENST00000472116 C1orf61Q13536 156 aa10.52□□□□□ -0.73
CDHR3-209ENST00000472116 PTK2BQ14289 1009 aa10.52□□□□□ -0.73
CDHR3-209ENST00000472116 SGSM1Q2NKQ1 1148 aa10.52□□□□□ -0.73
CDHR3-209ENST00000472116 CACNA2D3Q8IZS8 1091 aa10.52□□□□□ -0.73
CDHR3-209ENST00000472116 XXYLT1Q8NBI6 393 aa10.52□□□□□ -0.73
CDHR3-209ENST00000472116 CCDC112Q8NEF3 446 aa10.52□□□□□ -0.73
CDHR3-209ENST00000472116 LMLNQ96KR4 655 aa10.52□□□□□ -0.73
CDHR3-209ENST00000472116 CCDC114Q96M63 670 aa10.52□□□□□ -0.73
CDHR3-209ENST00000472116 RUBCNLQ9H714 662 aa10.52□□□□□ -0.73
CDHR3-209ENST00000472116 PANK4Q9NVE7 773 aa10.52□□□□□ -0.73
CDHR3-209ENST00000472116 SIRPGQ9P1W8 387 aa10.52□□□□□ -0.73
CDHR3-209ENST00000472116 SARDHQ9UL12 918 aa10.52□□□□□ -0.73
CDHR3-209ENST00000472116 CHD5Q8TDI0 1954 aa10.52□□□□□ -0.73
CDHR3-209ENST00000472116 DIDO1Q9BTC0 2240 aaKnown RBP10.52□□□□□ -0.73
CDHR3-209ENST00000472116 OTOGQ6ZRI0 2925 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 GOLGA6L7A0A1B0GV03 622 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 A0A1W2PQM1 296 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 WIPF3A6NGB9 483 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 KPNA3O00505 521 aaPredicted RBP10.51□□□□□ -0.73
CDHR3-209ENST00000472116 EIF3DO15371 548 aaKnown RBP eCLIP10.51□□□□□ -0.73
CDHR3-209ENST00000472116 MSI1O43347 362 aaKnown RBP10.51□□□□□ -0.73
CDHR3-209ENST00000472116 HNRNPRO43390 633 aaKnown RBP10.51□□□□□ -0.73
CDHR3-209ENST00000472116 ACSL4O60488 711 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 CLDN1O95832 211 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 ZBED1O96006 694 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 HOXB1P14653 301 aaPredicted RBP10.51□□□□□ -0.73
CDHR3-209ENST00000472116 VAV1P15498 845 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 TKTL1P51854 596 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 NEK4P51957 841 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 TAS2R38P59533 333 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 RPS24P62847 133 aaKnown RBP10.51□□□□□ -0.73
CDHR3-209ENST00000472116 RPS21P63220 83 aaKnown RBP10.51□□□□□ -0.73
CDHR3-209ENST00000472116 IRX6P78412 446 aaPredicted RBP10.51□□□□□ -0.73
CDHR3-209ENST00000472116 NUCB2P80303 420 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 CDC20Q12834 499 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 DEFB109BQ30KR1 87 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 PIP5KL1Q5T9C9 394 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 FAXCQ5TGI0 409 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 MMS22LQ6ZRQ5 1243 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 ASB18Q6ZVZ8 466 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 CENPQQ7L2Z9 268 aaPredicted RBP10.51□□□□□ -0.73
CDHR3-209ENST00000472116 TIPARPQ7Z3E1 657 aaKnown RBP10.51□□□□□ -0.73
CDHR3-209ENST00000472116 CCNJLQ8IV13 435 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 CCDC65Q8IXS2 484 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 CCDC13Q8IYE1 715 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 PHACTR4Q8IZ21 702 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 RBFAQ8N0V3 343 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 ZNF516Q92618 1163 aa10.51□□□□□ -0.73
CDHR3-209ENST00000472116 TAF4BQ92750 862 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms