RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 ELF1P32519 619 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 MAGEA11P43364 429 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 RABGGTBP53611 331 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 IRX4P78413 519 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 FAM189BP81408 668 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 ITGA7Q13683 1181 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 CES4AQ5XG92 561 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 CES3Q6UWW8 571 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 RINLQ6ZS11 566 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 ZCCHC23Q6ZST2 131 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 SLC24A5Q71RS6 500 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 NET1Q7Z628 596 aaPredicted RBP10.81□□□□□ -0.68
APLF-204ENST00000471727 RNF180Q86T96 592 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.81□□□□□ -0.68
APLF-204ENST00000471727 NUP93Q8N1F7 819 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 STMN2Q93045 179 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 CMTM5Q96DZ9 223 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 MFSD3Q96ES6 412 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 VPS39Q96JC1 886 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 C20orf27Q9GZN8 174 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.81□□□□□ -0.68
APLF-204ENST00000471727 ZCWPW1Q9H0M4 648 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 TRPV6Q9H1D0 765 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 NMRAL1Q9HBL8 299 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 CHRAC1Q9NRG0 131 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 IARS2Q9NSE4 1012 aaKnown RBP10.81□□□□□ -0.68
APLF-204ENST00000471727 OLA1Q9NTK5 396 aaKnown RBP10.81□□□□□ -0.68
APLF-204ENST00000471727 PIH1D1Q9NWS0 290 aaKnown RBP10.81□□□□□ -0.68
APLF-204ENST00000471727 NEU3Q9UQ49 428 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 TLR6Q9Y2C9 796 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 INPP5FQ9Y2H2 1132 aa10.81□□□□□ -0.68
APLF-204ENST00000471727 FAM155AB1AL88 458 aaPredicted RBP10.8□□□□□ -0.68
APLF-204ENST00000471727 TM7SF2O76062 418 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 PRKCGP05129 697 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 ENO1P06733 434 aaKnown RBP10.8□□□□□ -0.68
APLF-204ENST00000471727 RHOQP17081 205 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 ADRA1AP35348 466 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 PSEN1P49768 467 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 CSRP3P50461 194 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 TUBP50607 506 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 RENBPP51606 427 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 DSC1Q08554 894 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 SMARCB1Q12824 385 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 SLC12A1Q13621 1099 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 HNRNPDQ14103 355 aaKnown RBP10.8□□□□□ -0.68
APLF-204ENST00000471727 TSNAXIP1Q2TAA8 658 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 TRMT5Q32P41 509 aaKnown RBP10.8□□□□□ -0.68
APLF-204ENST00000471727 NOMO2Q5JPE7 1267 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 PPM1JQ5JR12 505 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 KIAA0408Q6ZU52 694 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 SCD5Q86SK9 330 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 TTC7BQ86TV6 843 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 MAB21L3Q8N8X9 362 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 ATP6V0D2Q8N8Y2 350 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 SCAMP5Q8TAC9 235 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 CALML6Q8TD86 181 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 CELF6Q96J87 481 aaKnown RBP10.8□□□□□ -0.68
APLF-204ENST00000471727 FAM167BQ9BTA0 163 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 FTHL17Q9BXU8 183 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 RHOBTB2Q9BYZ6 727 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 SLC39A8Q9C0K1 460 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 SLC25A51Q9H1U9 297 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 ARNT2Q9HBZ2 717 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 VPS45Q9NRW7 570 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 SLC17A6Q9P2U8 582 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 DNAJB4Q9UDY4 337 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 MARCOQ9UEW3 520 aaPredicted RBP10.8□□□□□ -0.68
APLF-204ENST00000471727 GABRQQ9UN88 632 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 SNX10Q9Y5X0 201 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 TLL2Q9Y6L7 1015 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 OR6C75A6NL08 312 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 E9PAM4 449 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 SLC22A2O15244 555 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 ITM2AO43736 263 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 HSPA4LO95757 839 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 NMBRP28336 390 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 ADSLP30566 484 aaPredicted RBP10.8□□□□□ -0.68
APLF-204ENST00000471727 SERPINB5P36952 375 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 IDH3AP50213 366 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 TNK2Q07912 1038 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 TUBB3Q13509 450 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 LAMB3Q13751 1172 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 THOC5Q13769 683 aaKnown RBP10.8□□□□□ -0.68
APLF-204ENST00000471727 ITGA9Q13797 1035 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 USP10Q14694 798 aaKnown RBP10.8□□□□□ -0.68
APLF-204ENST00000471727 CCDC6Q16204 474 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 ACCSLQ4AC99 568 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 PAN2Q504Q3 1202 aaKnown RBP10.8□□□□□ -0.68
APLF-204ENST00000471727 CFAP157Q5JU67 520 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 RABGAP1LQ5R372 815 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 KIAA0930Q6ICG6 404 aaPredicted RBP10.8□□□□□ -0.68
APLF-204ENST00000471727 ZYG11AQ6WRX3 759 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 OTOP3Q7RTS5 596 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 CMC1Q7Z7K0 106 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 ZC3HC1Q86WB0 502 aaKnown RBP10.8□□□□□ -0.68
APLF-204ENST00000471727 TREML1Q86YW5 311 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 SCUBE1Q8IWY4 988 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 LMNTD2Q8IXW0 634 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 UMODL1-AS1Q8N2C9 162 aa10.8□□□□□ -0.68
APLF-204ENST00000471727 PDCD6IPQ8WUM4 868 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms