RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 CALN1Q9BXU9 219 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 FZD3Q9NPG1 666 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.78□□□□□ -0.04
HMGN1-208ENST00000443046 SLC25A13Q9UJS0 675 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 HS3ST2Q9Y278 367 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 PCDHB4Q9Y5E5 795 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 ENTPD2Q9Y5L3 495 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 HS3ST3A1Q9Y663 406 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 CSNK1G3Q9Y6M4 447 aa14.78□□□□□ -0.04
HMGN1-208ENST00000443046 AHCTF1Q8WYP5 2266 aa14.77□□□□□ -0.04
HMGN1-208ENST00000443046 TEX15Q9BXT5 2789 aa14.77□□□□□ -0.04
HMGN1-208ENST00000443046 EME2A4GXA9 379 aaPredicted RBP14.77□□□□□ -0.05
HMGN1-208ENST00000443046 RNF103O00237 685 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 NEBLO76041 1014 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 CSF2P04141 144 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 RBMS1P29558 406 aaKnown RBP14.77□□□□□ -0.05
HMGN1-208ENST00000443046 AKT2P31751 481 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 CLDN2P57739 230 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 HNRNPKP61978 463 aaKnown RBP eCLIP14.77□□□□□ -0.05
HMGN1-208ENST00000443046 NUCB2P80303 420 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 SRSF1Q07955 248 aaKnown RBP eCLIP14.77□□□□□ -0.05
HMGN1-208ENST00000443046 FZD2Q14332 565 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 C5orf22Q49AR2 442 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 ACCSLQ4AC99 568 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 RABGAP1LQ5R372 815 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 ZCCHC8Q6NZY4 707 aaKnown RBP14.77□□□□□ -0.05
HMGN1-208ENST00000443046 KRBA2Q6ZNG9 492 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 Q6ZSR6 202 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 TMEM110Q86TL2 294 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 ATP6V0D2Q8N8Y2 350 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 EXD3Q8N9H8 876 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 OR2A12Q8NGT7 310 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 ARRDC3Q96B67 414 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 SLC4A5Q9BY07 1137 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 POPDC2Q9HBU9 364 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 EVA1BQ9NVM1 165 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 TBC1D30Q9Y2I9 924 aa14.77□□□□□ -0.05
HMGN1-208ENST00000443046 SPTY2D1-AS1A0A0U1RR47 76 aa14.76□□□□□ -0.05
HMGN1-208ENST00000443046 PMS2P1A4D2B8 440 aa14.76□□□□□ -0.05
HMGN1-208ENST00000443046 EFSO43281 561 aa14.76□□□□□ -0.05
HMGN1-208ENST00000443046 SRCP12931 536 aa14.76□□□□□ -0.05
HMGN1-208ENST00000443046 KRT10P13645 584 aa14.76□□□□□ -0.05
HMGN1-208ENST00000443046 NME1P15531 152 aaKnown RBP14.76□□□□□ -0.05
HMGN1-208ENST00000443046 ZNF18P17022 549 aa14.76□□□□□ -0.05
HMGN1-208ENST00000443046 CHRNA3P32297 505 aa14.76□□□□□ -0.05
HMGN1-208ENST00000443046 MLLT3P42568 568 aaPredicted RBP14.76□□□□□ -0.05
HMGN1-208ENST00000443046 ACADSBP45954 432 aa14.76□□□□□ -0.05
HMGN1-208ENST00000443046 IRAK1P51617 712 aa14.76□□□□□ -0.05
HMGN1-208ENST00000443046 YWHAZP63104 245 aaKnown RBP14.76□□□□□ -0.05
HMGN1-208ENST00000443046 FKBP3Q00688 224 aaKnown RBP14.76□□□□□ -0.05
HMGN1-208ENST00000443046 CLN3Q13286 438 aa14.76□□□□□ -0.05
HMGN1-208ENST00000443046 COBLL1Q53SF7 1204 aa14.76□□□□□ -0.05
HMGN1-208ENST00000443046 ZNF542PQ5EBM4 170 aa14.76□□□□□ -0.05
HMGN1-208ENST00000443046 CCDC81Q6ZN84 652 aa14.76□□□□□ -0.05
HMGN1-208ENST00000443046 ZNF548Q8NEK5 533 aaPredicted RBP14.76□□□□□ -0.05
HMGN1-208ENST00000443046 HDAC8Q9BY41 377 aa14.76□□□□□ -0.05
HMGN1-208ENST00000443046 DNAJC28Q9NX36 388 aa14.76□□□□□ -0.05
HMGN1-208ENST00000443046 NCKIPSDQ9NZQ3 722 aa14.76□□□□□ -0.05
HMGN1-208ENST00000443046 IL17BQ9UHF5 180 aa14.76□□□□□ -0.05
HMGN1-208ENST00000443046 SALL4Q9UJQ4 1053 aa14.76□□□□□ -0.05
HMGN1-208ENST00000443046 CNTN6Q9UQ52 1028 aa14.76□□□□□ -0.05
HMGN1-208ENST00000443046 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.75□□□□□ -0.05
HMGN1-208ENST00000443046 POM121BA6NF01 834 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 A6NNZ2 444 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 TCEA3O75764 348 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 MT-CO1P00395 513 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 SLC2A3P11169 496 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 PRCPP42785 496 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 FMO5P49326 533 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 PMS1P54277 932 aaKnown RBP14.75□□□□□ -0.05
HMGN1-208ENST00000443046 CENPCQ03188 943 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 CCDC15Q0P6D6 951 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 ZNF177Q13360 481 aaPredicted RBP14.75□□□□□ -0.05
HMGN1-208ENST00000443046 FGL2Q14314 439 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 MEA1Q16626 185 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 CDKN3Q16667 212 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 LINC00303Q3SY05 128 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 SEL1L3Q68CR1 1132 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 ANKRD40Q6AI12 368 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 GUSBP11Q6P575 273 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 KYAT3Q6YP21 454 aaKnown RBP14.75□□□□□ -0.05
HMGN1-208ENST00000443046 RBM44Q6ZP01 1051 aaKnown RBP14.75□□□□□ -0.05
HMGN1-208ENST00000443046 ERN2Q76MJ5 926 aaKnown RBP14.75□□□□□ -0.05
HMGN1-208ENST00000443046 TPCN2Q8NHX9 752 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 SNX21Q969T3 373 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 NT5C1BQ96P26 610 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 PSMB7Q99436 277 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 THAP9Q9H5L6 903 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 ST7Q9NRC1 585 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 ARMCX3Q9UH62 379 aaPredicted RBP14.75□□□□□ -0.05
HMGN1-208ENST00000443046 SLC12A6Q9UHW9 1150 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 KLF15Q9UIH9 416 aa14.75□□□□□ -0.05
HMGN1-208ENST00000443046 E5RJQ4 531 aa14.74□□□□□ -0.05
HMGN1-208ENST00000443046 TERTO14746 1132 aaKnown RBP14.74□□□□□ -0.05
HMGN1-208ENST00000443046 TPP1O14773 563 aa14.74□□□□□ -0.05
HMGN1-208ENST00000443046 PDX1P52945 283 aa14.74□□□□□ -0.05
HMGN1-208ENST00000443046 GCNT1Q02742 428 aa14.74□□□□□ -0.05
HMGN1-208ENST00000443046 AUHQ13825 339 aaKnown RBP14.74□□□□□ -0.05
HMGN1-208ENST00000443046 TAF5Q15542 800 aa14.74□□□□□ -0.05
HMGN1-208ENST00000443046 OR6B2Q6IFH4 312 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms