RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 ANKDD1AQ495B1 522 aa14.84□□□□□ -0.03
SEMA3F-202ENST00000413852 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.84□□□□□ -0.03
SEMA3F-202ENST00000413852 RNF139Q8WU17 664 aa14.84□□□□□ -0.03
SEMA3F-202ENST00000413852 PDCD6IPQ8WUM4 868 aaKnown RBP14.84□□□□□ -0.03
SEMA3F-202ENST00000413852 NLRP7Q8WX94 980 aa14.84□□□□□ -0.03
SEMA3F-202ENST00000413852 VPS39Q96JC1 886 aa14.84□□□□□ -0.03
SEMA3F-202ENST00000413852 CCT7Q99832 543 aa14.84□□□□□ -0.03
SEMA3F-202ENST00000413852 GCOM2Q9BZD3 368 aaPredicted RBP14.84□□□□□ -0.03
SEMA3F-202ENST00000413852 C2orf40Q9H1Z8 148 aa14.84□□□□□ -0.03
SEMA3F-202ENST00000413852 CROCCQ5TZA2 2017 aa14.84□□□□□ -0.03
SEMA3F-202ENST00000413852 ATP6AP2A0A1C7CYW4 349 aa14.83□□□□□ -0.03
SEMA3F-202ENST00000413852 FAM149AA5PLN7 773 aa14.83□□□□□ -0.03
SEMA3F-202ENST00000413852 TPST1O60507 370 aa14.83□□□□□ -0.03
SEMA3F-202ENST00000413852 ATP6AP2O75787 350 aa14.83□□□□□ -0.03
SEMA3F-202ENST00000413852 GNAO1P09471 354 aa14.83□□□□□ -0.03
SEMA3F-202ENST00000413852 SERPINB8P50452 374 aa14.83□□□□□ -0.03
SEMA3F-202ENST00000413852 RPL14P50914 215 aaKnown RBP14.83□□□□□ -0.03
SEMA3F-202ENST00000413852 LIMK2P53671 638 aa14.83□□□□□ -0.03
SEMA3F-202ENST00000413852 EMP3P54852 163 aa14.83□□□□□ -0.03
SEMA3F-202ENST00000413852 ADARP55265 1226 aaKnown RBP14.83□□□□□ -0.03
SEMA3F-202ENST00000413852 RBP5P82980 135 aa14.83□□□□□ -0.03
SEMA3F-202ENST00000413852 INCA1Q0VD86 236 aa14.83□□□□□ -0.03
SEMA3F-202ENST00000413852 TICAM1Q8IUC6 712 aa14.83□□□□□ -0.03
SEMA3F-202ENST00000413852 TMEM151AQ8N4L1 468 aa14.83□□□□□ -0.03
SEMA3F-202ENST00000413852 TRIML2Q8N7C3 387 aa14.83□□□□□ -0.03
SEMA3F-202ENST00000413852 STN1Q9H668 368 aaKnown RBP14.83□□□□□ -0.03
SEMA3F-202ENST00000413852 NOL11Q9H8H0 719 aaKnown RBP14.83□□□□□ -0.03
SEMA3F-202ENST00000413852 CCDC167Q9P0B6 97 aa14.83□□□□□ -0.03
SEMA3F-202ENST00000413852 TCAF2A6NFQ2 919 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 TNFAIP8O95379 198 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 ME2P23368 584 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 GABRB3P28472 473 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 ADIGQ0VDE8 80 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 USP10Q14694 798 aaKnown RBP14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 KIZQ2M2Z5 673 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 OTOP3Q7RTS5 596 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 KCNMB4Q86W47 210 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 CEP97Q8IW35 865 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 MFSD6LQ8IWD5 586 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 APBB2Q92870 758 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 NXNL1Q96CM4 212 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 DTNBP1Q96EV8 351 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 LRCH3Q96II8 777 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 CPNE1Q99829 537 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 CCDC28BQ9BUN5 200 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 ATXN3LQ9H3M9 355 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 CYP3A43Q9HB55 503 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 OXSMQ9NWU1 459 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 GTSE1Q9NYZ3 720 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 SOCS7O14512 581 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 HDAC3O15379 428 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 AP1G1O43747 822 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 TRMUO75648 421 aaKnown RBP14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 TIPRLO75663 272 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 CDH2P19022 906 aaPredicted RBP14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 SPRP35270 261 aaPredicted RBP14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 GARSP41250 739 aaKnown RBP14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 ZBTB17Q13105 803 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 MPP3Q13368 585 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 GRTP1Q5TC63 336 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 ITPRIPL1Q6GPH6 555 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 TRIM67Q6ZTA4 783 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 FSTL5Q8N475 847 aaPredicted RBP14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 NPWQ8N729 165 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 SPATA22Q8NHS9 363 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 SIKE1Q9BRV8 207 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 MRPS26Q9BYN8 205 aaKnown RBP14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 GIMAP2Q9UG22 337 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 TMCO1Q9UM00 188 aa14.83□□□□□ -0.04
SEMA3F-202ENST00000413852 PHIPQ8WWQ0 1821 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 PDLIM1O00151 329 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 ACOT8O14734 319 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 AURKAO14965 403 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 DLX3O60479 287 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 ZNF26P17031 533 aaPredicted RBP14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 CD68P34810 354 aaPredicted RBP14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 XIAPP98170 497 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 PPIDQ08752 370 aaKnown RBP14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 TNFAIP1Q13829 316 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 PTK2BQ14289 1009 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 SH3D19Q5HYK7 790 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 SH2D4BQ5SQS7 431 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 STXBP5Q5T5C0 1151 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 OTUD1Q5VV17 481 aaPredicted RBP14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 POTEAQ6S8J7 498 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 C16orf89Q6UX73 402 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 TSPAN14Q8NG11 270 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 TMEM79Q9BSE2 394 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 MLPHQ9BV36 600 aaPredicted RBP14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 EIF2AQ9BY44 585 aaKnown RBP14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 HOXC10Q9NYD6 342 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 XPR1Q9UBH6 696 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 EBF1Q9UH73 591 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 PRSS51A0A1B0GVH4 220 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 M0QYT0 321 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 SPTLC1O15269 473 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 PPARGP37231 505 aaPredicted RBP14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 CTBSQ01459 385 aa14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 PDAP1Q13442 181 aaKnown RBP14.82□□□□□ -0.04
SEMA3F-202ENST00000413852 CCDC153Q494R4 210 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms