RNA–Protein interactions for RNA: ENST00000406477.7

PARVB-204, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-204ENST00000406477 PCDHB12Q9Y5F1 795 aa16.51■□□□□ 0.23
PARVB-204ENST00000406477 NUP205Q92621 2012 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 TRIM43BA6NCK2 446 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 PRRG1O14668 218 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 HLA-DQB2P05538 268 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 GP5P40197 560 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 EPHB3P54753 998 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 CRADDP78560 199 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 ANKRD20A4Q4UJ75 823 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 ALFQ53S48 1182 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 PCID2Q5JVF3 399 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 FAM117BQ6P1L5 589 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 C6orf89Q6UWU4 347 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 PACS1Q6VY07 963 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 TFAP2DQ7Z6R9 452 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 SRLQ86TD4 932 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 ITIH5Q86UX2 942 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 TRIM42Q8IWZ5 723 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 TRIM43Q96BQ3 446 aaPredicted RBP16.5■□□□□ 0.23
PARVB-204ENST00000406477 HMCESQ96FZ2 354 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 TMEM106CQ9BVX2 250 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 KIFC1Q9BW19 673 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 MRM3Q9HC36 420 aaKnown RBP16.5■□□□□ 0.23
PARVB-204ENST00000406477 IL23AQ9NPF7 189 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 FGFR1OP2Q9NVK5 253 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 RRP15Q9Y3B9 282 aaKnown RBP16.5■□□□□ 0.23
PARVB-204ENST00000406477 COL4A6Q14031 1691 aa16.5■□□□□ 0.23
PARVB-204ENST00000406477 GOLGA8RI6L899 631 aa16.49■□□□□ 0.23
PARVB-204ENST00000406477 SNX3O60493 162 aa16.49■□□□□ 0.23
PARVB-204ENST00000406477 USP12O75317 370 aa16.49■□□□□ 0.23
PARVB-204ENST00000406477 CNTN5O94779 1100 aa16.49■□□□□ 0.23
PARVB-204ENST00000406477 OR1E1P30953 314 aa16.49■□□□□ 0.23
PARVB-204ENST00000406477 CDH4P55283 916 aa16.49■□□□□ 0.23
PARVB-204ENST00000406477 LGI2Q8N0V4 545 aa16.49■□□□□ 0.23
PARVB-204ENST00000406477 BBS5Q8N3I7 341 aa16.49■□□□□ 0.23
PARVB-204ENST00000406477 TEX26Q8N6G2 289 aa16.49■□□□□ 0.23
PARVB-204ENST00000406477 OTUD6BQ8N6M0 293 aa16.49■□□□□ 0.23
PARVB-204ENST00000406477 ZNF599Q96NL3 588 aa16.49■□□□□ 0.23
PARVB-204ENST00000406477 FSD1LQ9BXM9 530 aa16.49■□□□□ 0.23
PARVB-204ENST00000406477 PITPNM3Q9BZ71 974 aa16.49■□□□□ 0.23
PARVB-204ENST00000406477 MAGEH1Q9H213 219 aa16.49■□□□□ 0.23
PARVB-204ENST00000406477 PIH1D1Q9NWS0 290 aaKnown RBP16.49■□□□□ 0.23
PARVB-204ENST00000406477 ZNF212Q9UDV6 495 aa16.49■□□□□ 0.23
PARVB-204ENST00000406477 PRDM4Q9UKN5 801 aa16.49■□□□□ 0.23
PARVB-204ENST00000406477 USP15Q9Y4E8 981 aaPredicted RBP16.49■□□□□ 0.23
PARVB-204ENST00000406477 ASB3Q9Y575 518 aa16.49■□□□□ 0.23
PARVB-204ENST00000406477 ATP9BO43861 1147 aa16.48■□□□□ 0.23
PARVB-204ENST00000406477 RFPL1O75677 317 aa16.48■□□□□ 0.23
PARVB-204ENST00000406477 LATS1O95835 1130 aa16.48■□□□□ 0.23
PARVB-204ENST00000406477 FOXN2P32314 431 aa16.48■□□□□ 0.23
PARVB-204ENST00000406477 SPRP35270 261 aaPredicted RBP16.48■□□□□ 0.23
PARVB-204ENST00000406477 IFT88Q13099 833 aa16.48■□□□□ 0.23
PARVB-204ENST00000406477 SERINC3Q13530 473 aa16.48■□□□□ 0.23
PARVB-204ENST00000406477 PABPC1LQ4VXU2 614 aaKnown RBP16.48■□□□□ 0.23
PARVB-204ENST00000406477 STXBP5Q5T5C0 1151 aa16.48■□□□□ 0.23
PARVB-204ENST00000406477 NADSYN1Q6IA69 706 aa16.48■□□□□ 0.23
PARVB-204ENST00000406477 CCDC121Q6ZUS5 278 aa16.48■□□□□ 0.23
PARVB-204ENST00000406477 ZNF354CQ86Y25 554 aa16.48■□□□□ 0.23
PARVB-204ENST00000406477 PPHLN1Q8NEY8 458 aaKnown RBP16.48■□□□□ 0.23
PARVB-204ENST00000406477 IPMKQ8NFU5 416 aa16.48■□□□□ 0.23
PARVB-204ENST00000406477 ATP2A3Q93084 1043 aa16.48■□□□□ 0.23
PARVB-204ENST00000406477 KLF6Q99612 283 aaPredicted RBP16.48■□□□□ 0.23
PARVB-204ENST00000406477 TRIM56Q9BRZ2 755 aaKnown RBP16.48■□□□□ 0.23
PARVB-204ENST00000406477 FICDQ9BVA6 458 aa16.48■□□□□ 0.23
PARVB-204ENST00000406477 RXFP1Q9HBX9 757 aa16.48■□□□□ 0.23
PARVB-204ENST00000406477 UBP1Q9NZI7 540 aa16.48■□□□□ 0.23
PARVB-204ENST00000406477 STARD13Q9Y3M8 1113 aa16.48■□□□□ 0.23
PARVB-204ENST00000406477 SHROOM3Q8TF72 1996 aa16.48■□□□□ 0.23
PARVB-204ENST00000406477 HTTP42858 3142 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 COCHO43405 550 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 PEX11BO96011 259 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 DHRS4L1P0CG22 281 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 ADRA1AP35348 466 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 HADHAP40939 763 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 KCNQ1P51787 676 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 CSE1LP55060 971 aaKnown RBP16.47■□□□□ 0.23
PARVB-204ENST00000406477 CERCAMQ5T4B2 595 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 PDPK2PQ6A1A2 396 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 PKN3Q6P5Z2 889 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 SPATA21Q7Z572 469 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 HERC6Q8IVU3 1022 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 GABPB2Q8TAK5 448 aaPredicted RBP16.47■□□□□ 0.23
PARVB-204ENST00000406477 IMP4Q96G21 291 aaKnown RBP16.47■□□□□ 0.23
PARVB-204ENST00000406477 SRPK1Q96SB4 655 aaKnown RBP16.47■□□□□ 0.23
PARVB-204ENST00000406477 PRKD2Q9BZL6 878 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 ZCWPW2A0A1B0GU75 182 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 UGT1A9O60656 530 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 CLDN11O75508 207 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 GJB5O95377 273 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 PAMP19021 973 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 CRHR1P34998 444 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 TWF1Q12792 350 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 PPIGQ13427 754 aaKnown RBP eCLIP16.47■□□□□ 0.23
PARVB-204ENST00000406477 DBN1Q16643 649 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 MROH9Q5TGP6 573 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 TMCO4Q5TGY1 634 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 CHST9Q7L1S5 443 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 DNAJB7Q7Z6W7 309 aaPredicted RBP16.47■□□□□ 0.23
PARVB-204ENST00000406477 FIBCD1Q8N539 461 aa16.47■□□□□ 0.23
PARVB-204ENST00000406477 SPATA22Q8NHS9 363 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms