RNA–Protein interactions for RNA: ENST00000393822.7

SFTPB-201, Transcript of surfactant protein B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFTPB, Length 3,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPB-201ENST00000393822 SLC8A1P32418 973 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 MMP13P45452 471 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 ITGA9Q13797 1035 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 TRIM71Q2Q1W2 868 aaKnown RBP10.65□□□□□ -0.7
SFTPB-201ENST00000393822 PLEKHG4Q58EX7 1191 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 ZRANB3Q5FWF4 1079 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 N4BP2L1Q5TBK1 243 aaPredicted RBP10.65□□□□□ -0.7
SFTPB-201ENST00000393822 OTUD1Q5VV17 481 aaPredicted RBP10.65□□□□□ -0.7
SFTPB-201ENST00000393822 SPATA21Q7Z572 469 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 SLC41A1Q8IVJ1 513 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 KLHL23Q8NBE8 558 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 OXNAD1Q96HP4 312 aaPredicted RBP10.65□□□□□ -0.7
SFTPB-201ENST00000393822 IGSF21Q96ID5 467 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 EBNA1BP2Q99848 306 aaKnown RBP10.65□□□□□ -0.7
SFTPB-201ENST00000393822 ZYG11BQ9C0D3 744 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 MAN1C1Q9NR34 630 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 HAUS2Q9NVX0 235 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 MARCH5Q9NX47 278 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 GTSE1Q9NYZ3 720 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 TEX28O15482 410 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 HOXA2O43364 376 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 OPHN1O60890 802 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 FOXN2P32314 431 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 NR2C2P49116 596 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 OXCT1P55809 520 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 WDR4P57081 412 aaKnown RBP10.65□□□□□ -0.7
SFTPB-201ENST00000393822 CRYMQ14894 314 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 CCDC6Q16204 474 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 SLC9A4Q6AI14 798 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 CDHR3Q6ZTQ4 885 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 MRPL10Q7Z7H8 261 aaKnown RBP10.65□□□□□ -0.7
SFTPB-201ENST00000393822 DDX53Q86TM3 631 aaKnown RBP10.65□□□□□ -0.7
SFTPB-201ENST00000393822 TRABD2AQ86V40 505 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 PSTKQ8IV42 348 aaKnown RBP10.65□□□□□ -0.7
SFTPB-201ENST00000393822 SNX31Q8N9S9 440 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.65□□□□□ -0.7
SFTPB-201ENST00000393822 ARNTL2Q8WYA1 636 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 KLHL29Q96CT2 875 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 UROC1Q96N76 676 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 QKIQ96PU8 341 aaKnown RBP eCLIP10.65□□□□□ -0.7
SFTPB-201ENST00000393822 C11orf49Q9H6J7 331 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 CFAP97Q9P2B7 532 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 YIPF1Q9Y548 306 aa10.65□□□□□ -0.7
SFTPB-201ENST00000393822 WDR90Q96KV7 1748 aa10.65□□□□□ -0.71
SFTPB-201ENST00000393822 LCHNA4D1U4 455 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 CCDC85CA6NKD9 419 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 SKAP2O75563 359 aaPredicted RBP10.64□□□□□ -0.71
SFTPB-201ENST00000393822 DGKIO75912 1065 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 STAU1O95793 577 aaKnown RBP10.64□□□□□ -0.71
SFTPB-201ENST00000393822 C8AP07357 584 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 MPP3Q13368 585 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 MS4A13Q5J8X5 152 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 CROCCP2Q86T23 111 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 TTC30BQ8N4P2 665 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 PGM2Q96G03 612 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 TSSK1BQ9BXA7 367 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 UBXN6Q9BZV1 441 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 ROPN1BQ9BZX4 212 aaPredicted RBP10.64□□□□□ -0.71
SFTPB-201ENST00000393822 ROPN1Q9HAT0 212 aaPredicted RBP10.64□□□□□ -0.71
SFTPB-201ENST00000393822 XAB2Q9HCS7 855 aaKnown RBP10.64□□□□□ -0.71
SFTPB-201ENST00000393822 FAM53CQ9NYF3 392 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 SPG21Q9NZD8 308 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 DNMT3LQ9UJW3 386 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 PCDHB9Q9Y5E1 797 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 K7ERQ8 282 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 CAPN15O75808 1086 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 CBX6O95503 412 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 ALDH3A1P30838 453 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 NME5P56597 212 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 ACTN3Q08043 901 aaPredicted RBP10.64□□□□□ -0.71
SFTPB-201ENST00000393822 ELAVL2Q12926 359 aaKnown RBP10.64□□□□□ -0.71
SFTPB-201ENST00000393822 MFN1Q8IWA4 741 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 ELMOD1Q8N336 334 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 BBS5Q8N3I7 341 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 TMEM199Q8N511 208 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 ZSCAN18Q8TBC5 510 aaPredicted RBP10.64□□□□□ -0.71
SFTPB-201ENST00000393822 WBP2Q969T9 261 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 ZFYVE19Q96K21 471 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 WDR83Q9BRX9 315 aaKnown RBP10.64□□□□□ -0.71
SFTPB-201ENST00000393822 RNF38Q9H0F5 515 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 PARP14Q460N5 1801 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 TRIM24O15164 1050 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 COCHO43405 550 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 HSPA4LO95757 839 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 ATF6P18850 670 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 TUFMP49411 452 aaKnown RBP10.64□□□□□ -0.71
SFTPB-201ENST00000393822 RHOAP61586 193 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 FOXD4Q12950 439 aaPredicted RBP10.64□□□□□ -0.71
SFTPB-201ENST00000393822 SKIV2LQ15477 1246 aaKnown RBP10.64□□□□□ -0.71
SFTPB-201ENST00000393822 PARP6Q2NL67 630 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 NAPEPLDQ6IQ20 393 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 EFCAB3Q8N7B9 438 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 CNTD1Q8N815 330 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 PPHLN1Q8NEY8 458 aaKnown RBP10.64□□□□□ -0.71
SFTPB-201ENST00000393822 SPPL2BQ8TCT7 592 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 ESAMQ96AP7 390 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 CCDC124Q96CT7 223 aaKnown RBP10.64□□□□□ -0.71
SFTPB-201ENST00000393822 MARK4Q96L34 752 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 ACSS3Q9H6R3 686 aa10.64□□□□□ -0.71
SFTPB-201ENST00000393822 MANSC1Q9H8J5 431 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms