RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 SLC8A1P32418 973 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 IRF9Q00978 393 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 DDR2Q16832 855 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 FAM26DQ5JW98 314 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 C1QTNF12Q5T7M4 302 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 MANEALQ5VSG8 457 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 RFWD3Q6PCD5 774 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 TRAF7Q6Q0C0 670 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 TREML1Q86YW5 311 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 TRIM42Q8IWZ5 723 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 TNS4Q8IZW8 715 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 GPR152Q8TDT2 470 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 KCNK4Q9NYG8 393 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 NKX1-2Q9UD57 310 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 MTSS1O43312 755 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 TYMPP19971 482 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 PAX3P23760 479 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 CST5P28325 142 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 CPA2P48052 419 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 ACLYP53396 1101 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 USP46P62068 366 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 NAB1Q13506 487 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 PPP2R5DQ14738 602 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 STXBP5Q5T5C0 1151 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 GRTP1Q5TC63 336 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 ITPRIPL1Q6GPH6 555 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 SDE2Q6IQ49 451 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 KDELC2Q7Z4H8 507 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 CRLF3Q8IUI8 442 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 TTC9BQ8N6N2 239 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 FBXO27Q8NI29 283 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 NSL1Q96IY1 281 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 B3GALT6Q96L58 329 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 UROC1Q96N76 676 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 VAT1Q99536 393 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 SMOC2Q9H3U7 446 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 TLE6Q9H808 572 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 IARS2Q9NSE4 1012 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 C20orf96Q9NUD7 363 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 DCDC2Q9UHG0 476 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 PRG3Q9Y2Y8 225 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 MIA3Q5JRA6 1907 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 ERI2A8K979 691 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 LILRB3O75022 631 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 ANP32DO95626 131 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 VAMP1P23763 118 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 CCR1P32246 355 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 OR1G1P47890 313 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 RASSF2P50749 326 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 LIMK2P53671 638 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 DSC1Q08554 894 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 MAPRE1Q15691 268 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 KCNMB4Q86W47 210 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 PPP1R14CQ8TAE6 165 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 TTC8Q8TAM2 541 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 MOCOSQ96EN8 888 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 HAPLN3Q96S86 360 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 MCMBPQ9BTE3 642 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 DENND2DQ9H6A0 471 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 RGS18Q9NS28 235 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 THAP1Q9NVV9 213 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 TAS2R1Q9NYW7 299 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 G3BP2Q9UN86 482 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 HS3ST4Q9Y661 456 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 MKI67P46013 3256 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 TET1Q8NFU7 2136 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 hCG_2014768A0A024R1R8 64 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 CAPN14A8MX76 684 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 GSC2O15499 205 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 MAP3K7O43318 606 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 CACNG3O60359 315 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 ENTPD5O75356 428 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 SOAT2O75908 522 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 RPLP2P05387 115 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 CCND1P24385 295 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 CCNCP24863 283 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 HOXC13P31276 330 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 MAGEA12P43365 314 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 SLC1A6P48664 564 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 NPY2RP49146 381 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 TUBP50607 506 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 ZNF135P52742 658 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 CDH17Q12864 832 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 GLB1LQ6UWU2 654 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 C4orf50Q6ZRC1 276 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 BEND5Q7L4P6 421 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 SPNS2Q8IVW8 549 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 COLGALT2Q8IYK4 626 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 ATPAF2Q8N5M1 289 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 PCSK9Q8NBP7 692 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 IPMKQ8NFU5 416 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 RAB3IL1Q8TBN0 382 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 TSGA13Q96PP4 275 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 SORT1Q99523 831 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 BTBD10Q9BSF8 475 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 OXCT2Q9BYC2 517 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 IL22Q9GZX6 179 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 ATXN3LQ9H3M9 355 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 PRM3Q9NNZ6 103 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms