RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 JMJD4Q9H9V9 463 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 BCO1Q9HAY6 547 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 HAUS2Q9NVX0 235 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 PPP1R14DQ9NXH3 145 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 ORC3Q9UBD5 711 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 EXTL2Q9UBQ6 330 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 TRMT112Q9UI30 125 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 VPS28Q9UK41 221 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 SUFUQ9UMX1 484 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 SSX2IPQ9Y2D8 614 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 TSC22D4Q9Y3Q8 395 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 TCAF1Q9Y4C2 921 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 PHIPQ8WWQ0 1821 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 CTAGE9A4FU28 777 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 C1QTNF3-AMACRE9PGA6 284 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 IKBKBO14920 756 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 CSTBP04080 98 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 ADRB2P07550 413 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 HLA-DPA1P20036 260 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 PSMA4P25789 261 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 SOX6P35712 828 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 PIK3CBP42338 1070 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 TUBP50607 506 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 ATP8B2P98198 1209 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 TLE1Q04724 770 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 TFCP2Q12800 502 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 NEDD9Q14511 834 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 PLS1Q14651 629 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 TRIM60Q495X7 471 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 TPGS2Q68CL5 300 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 HAUS3Q68CZ6 603 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 FAM111BQ6SJ93 734 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 B4GALNT4Q76KP1 1039 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 ATG9AQ7Z3C6 839 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 DGLUCYQ7Z3D6 616 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 HEATR3Q7Z4Q2 680 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 PQLC1Q8N2U9 271 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 AADATQ8N5Z0 425 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 TMCO5AQ8N6Q1 288 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 TRIML2Q8N7C3 387 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 DENND6BQ8NEG7 585 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 OR7D4Q8NG98 312 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 ZFAND2BQ8WV99 257 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 KIAA1191Q96A73 305 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 TMX3Q96JJ7 454 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 TMEM237Q96Q45 408 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 ADOQ96SZ5 270 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 TUBA1CQ9BQE3 449 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 TRIM5Q9C035 493 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 VCX3BQ9H321 246 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 ZMAT3Q9HA38 289 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 CERS4Q9HA82 394 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 CCDC177Q9NQR7 707 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 LMBRD1Q9NUN5 540 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 TESMINQ9Y4I5 508 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 MTCH2Q9Y6C9 303 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 DMDP11532 3685 aa5.32□□□□□ -1.56
ECHDC1-204ENST00000368292 ANKRD11Q6UB99 2663 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 COL4A4P53420 1690 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 XDHP47989 1333 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 MYBBP1AQ9BQG0 1328 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 FAM208BQ5VWN6 2430 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 H3BUI4 141 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 DDX39AO00148 427 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 CETN3O15182 167 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 DCXO43602 365 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 STC2O76061 302 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 ANXA1P04083 346 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 HEXBP07686 556 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 CKBP12277 381 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 MYF5P13349 255 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 ALADP13716 330 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 TYRP14679 529 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 LAG3P18627 525 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 MALP21145 153 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 GUCY1A2P33402 732 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 MTIF2P46199 727 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 WNT3AP56704 352 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 ITIH3Q06033 890 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 PPATQ06203 517 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 FGL2Q14314 439 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 RAB39AQ14964 217 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 TAF5Q15542 800 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 SMAD1Q15797 465 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 STK11Q15831 433 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 HS1BP3Q53T59 392 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 CCDC157Q569K6 752 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 SH2D4BQ5SQS7 431 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 SFMBT2Q5VUG0 894 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 FCRLBQ6BAA4 426 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 RGS9BPQ6ZS82 235 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 SEPT14Q6ZU15 432 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 CEP97Q8IW35 865 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 PALM2Q8IXS6 379 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 D2HGDHQ8N465 521 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 PDCL2Q8N4E4 241 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 ANKRD13CQ8N6S4 541 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 ANKRD20A12PQ8NF67 263 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 REPS2Q8NFH8 660 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 TRIM58Q8NG06 486 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms