RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 ANKRD20A4Q4UJ75 823 aa10.77□□□□□ -0.68
SMC3-201ENST00000361804 C9orf57Q5W0N0 161 aa10.77□□□□□ -0.68
SMC3-201ENST00000361804 LAYNQ6UX15 382 aa10.77□□□□□ -0.68
SMC3-201ENST00000361804 PQLC1Q8N2U9 271 aa10.77□□□□□ -0.68
SMC3-201ENST00000361804 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.77□□□□□ -0.68
SMC3-201ENST00000361804 EMID1Q96A84 441 aaPredicted RBP10.77□□□□□ -0.68
SMC3-201ENST00000361804 VPS39Q96JC1 886 aa10.77□□□□□ -0.68
SMC3-201ENST00000361804 PRPF18Q99633 342 aaKnown RBP10.77□□□□□ -0.68
SMC3-201ENST00000361804 CENPKQ9BS16 269 aa10.77□□□□□ -0.68
SMC3-201ENST00000361804 ADAMTS10Q9H324 1103 aa10.77□□□□□ -0.68
SMC3-201ENST00000361804 CYP4F12Q9HCS2 524 aa10.77□□□□□ -0.68
SMC3-201ENST00000361804 NYNRINQ9P2P1 1898 aaKnown RBP10.77□□□□□ -0.68
SMC3-201ENST00000361804 C9IYK1 514 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 GPR32O75388 356 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 CRTAMO95727 393 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 MT-CYBP00156 380 aaPredicted RBP10.77□□□□□ -0.69
SMC3-201ENST00000361804 GABRB3P28472 473 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 CHN2P52757 468 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 PLK1P53350 603 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 GJA9P57773 515 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 RALGDSQ12967 914 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 ZBTB6Q15916 424 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 FAM187BQ17R55 369 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 NOMO2Q5JPE7 1267 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 AAGABQ6PD74 315 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 GK5Q6ZS86 529 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 KCNMB4Q86W47 210 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 RNF135Q8IUD6 432 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 MFSD6LQ8IWD5 586 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 ANKRD52Q8NB46 1076 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 NPLOC4Q8TAT6 608 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 ZFAND2BQ8WV99 257 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 ZNF419Q96HQ0 510 aaPredicted RBP10.77□□□□□ -0.69
SMC3-201ENST00000361804 ACE2Q9BYF1 805 aaPredicted RBP10.77□□□□□ -0.69
SMC3-201ENST00000361804 LIN28AQ9H9Z2 209 aaKnown RBP10.77□□□□□ -0.69
SMC3-201ENST00000361804 MEIS3P2A8K0S8 358 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 GRID2O43424 1007 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 SMPD1P17405 629 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 GRK2P25098 689 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 SOX11P35716 441 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 MATKP42679 507 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 AFF1P51825 1210 aaKnown RBP10.77□□□□□ -0.69
SMC3-201ENST00000361804 LIMK2P53671 638 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 CNGA3Q16281 694 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 SLC5A9Q2M3M2 681 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 PITRM1Q5JRX3 1037 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 KIAA0319Q5VV43 1072 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 CATSPER4Q7RTX7 472 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 ZNF512Q96ME7 567 aaPredicted RBP10.77□□□□□ -0.69
SMC3-201ENST00000361804 SLC2A6Q9UGQ3 507 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 C9JVG2 144 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 TFAP2AP05549 437 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 PCSK6P29122 969 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 MYBPC1Q00872 1141 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 POU6F1Q14863 301 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 NADK2Q4G0N4 442 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 C9orf131Q5VYM1 1079 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 LIMS2Q7Z4I7 341 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 CEP97Q8IW35 865 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 B4GALNT2Q8NHY0 566 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 ACMSDQ8TDX5 336 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 RNF181Q9P0P0 153 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 RUVBL2Q9Y230 463 aaKnown RBP10.77□□□□□ -0.69
SMC3-201ENST00000361804 AP4B1Q9Y6B7 739 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 SLC4A7Q9Y6M7 1214 aa10.77□□□□□ -0.69
SMC3-201ENST00000361804 YJEFN3A6XGL0 299 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 H3BRB1 525 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 CXCL11O14625 94 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 TRIM13O60858 407 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 GLDCP23378 1020 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 CNTFP26441 200 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 CALRP27797 417 aaKnown RBP10.76□□□□□ -0.69
SMC3-201ENST00000361804 EPHX2P34913 555 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 BCAT1P54687 386 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 MPP3Q13368 585 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 TTLL4Q14679 1199 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 AMIGO2Q86SJ2 522 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 TMEM151AQ8N4L1 468 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 CPNE1Q99829 537 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 SLC39A3Q9BRY0 314 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 GCOM2Q9BZD3 368 aaPredicted RBP10.76□□□□□ -0.69
SMC3-201ENST00000361804 FAM192AQ9GZU8 254 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 TUT1Q9H6E5 874 aaKnown RBP10.76□□□□□ -0.69
SMC3-201ENST00000361804 LZTS1Q9Y250 596 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 THSD7BQ9C0I4 1608 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 BTBD19C9JJ37 291 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 VILLO15195 856 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 JCHAINP01591 159 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 FYNP06241 537 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 ALOX15P16050 662 aaPredicted RBP10.76□□□□□ -0.69
SMC3-201ENST00000361804 TFEBP19484 476 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 RANBP1P43487 201 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 CXCR3P49682 368 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 SERPINB8P50452 374 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 CYTH1Q15438 398 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 PPP1R3AQ16821 1122 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 CYP2R1Q6VVX0 501 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 NT5DC4Q86YG4 428 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 LSMEM2Q8N112 164 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 ATP6V1E2Q96A05 226 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms