RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 PCDHGB3Q9Y5G1 929 aa13.64□□□□□ -0.23
LMBR1-201ENST00000353442 KCNK1O00180 336 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 CYP11B2P19099 503 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 LRP8Q14114 963 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 SF1Q15637 639 aaKnown RBP13.63□□□□□ -0.23
LMBR1-201ENST00000353442 GALNT7Q86SF2 657 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 OR56A4Q8NGH8 313 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 SUN3Q8TAQ9 357 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 KBTBD7Q8WVZ9 684 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 TINF2Q9BSI4 451 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 DPEP2Q9H4A9 486 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 OGDHLQ9ULD0 1010 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 ASF1AQ9Y294 204 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 KPNA5O15131 536 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 APODP05090 189 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 CCNA2P20248 432 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 CBX5P45973 191 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 DSG1Q02413 1049 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 KLHDC7AQ5VTJ3 777 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 TMC5Q6UXY8 1006 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 CHERPQ8IWX8 916 aaKnown RBP13.63□□□□□ -0.23
LMBR1-201ENST00000353442 FAM126BQ8IXS8 530 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 CDYL2Q8N8U2 506 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 P2RX7Q99572 595 aaKnown RBP13.63□□□□□ -0.23
LMBR1-201ENST00000353442 ZFP14Q9HCL3 533 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 DLGAP2Q9P1A6 1054 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 PTGFRNQ9P2B2 879 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 PHF24Q9UPV7 400 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 ATXN2Q99700 1313 aaKnown RBP13.63□□□□□ -0.23
LMBR1-201ENST00000353442 LRATO95237 230 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 PIRTP0C851 137 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 IRF8Q02556 426 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 XKR6Q5GH73 641 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 DDHD1Q8NEL9 900 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 SF3B1O75533 1304 aaKnown RBP eCLIP13.63□□□□□ -0.232e-6■■■■■ 135.9
LMBR1-201ENST00000353442 LOC100506127A0A0U1RQW1 187 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 FAM86B1E9PN63 330 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 ADH1AP07327 375 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 CD86P42081 329 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 TAF2Q6P1X5 1199 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 SCIMPQ6UWF3 145 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 SLC22A9Q8IVM8 553 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 SUGP1Q8IWZ8 645 aaKnown RBP13.63□□□□□ -0.23
LMBR1-201ENST00000353442 ZNF611Q8N823 705 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 FAM81AQ8TBF8 368 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 ATL1Q8WXF7 558 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 ISCA1Q9BUE6 129 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 DCLK3Q9C098 648 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 FOXN3O00409 490 aaPredicted RBP13.63□□□□□ -0.23
LMBR1-201ENST00000353442 TM9SF1O15321 606 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 WARSP23381 471 aaKnown RBP13.63□□□□□ -0.23
LMBR1-201ENST00000353442 HK2P52789 917 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 OC90Q02509 493 aaPredicted RBP13.63□□□□□ -0.23
LMBR1-201ENST00000353442 RASGRP2Q7LDG7 609 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 ATCAYQ86WG3 371 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 UBAP1Q9NZ09 502 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 PSMD13Q9UNM6 376 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 TRIM64BA6NI03 449 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 TSPAN8P19075 237 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 MAD2L1Q13257 205 aaPredicted RBP13.63□□□□□ -0.23
LMBR1-201ENST00000353442 KRR1Q13601 381 aaKnown RBP13.63□□□□□ -0.23
LMBR1-201ENST00000353442 CDH24Q86UP0 819 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 FAM126AQ9BYI3 521 aaPredicted RBP13.63□□□□□ -0.23
LMBR1-201ENST00000353442 SEMA6AQ9H2E6 1030 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 STK39Q9UEW8 545 aa13.63□□□□□ -0.23
LMBR1-201ENST00000353442 NCAM2O15394 837 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 MED24O75448 989 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 PUS10Q3MIT2 529 aaKnown RBP13.62□□□□□ -0.23
LMBR1-201ENST00000353442 DEFB106AQ8N104 65 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 FAIM2Q9BWQ8 316 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 LMAN2LQ9H0V9 348 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 RASSF1Q9NS23 344 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 ABI3Q9P2A4 366 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 PTPN11Q06124 597 aaPredicted RBP13.62□□□□□ -0.23
LMBR1-201ENST00000353442 ATP1A4Q13733 1029 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 CCINQ13939 588 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 GCATO75600 419 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 ELNP15502 786 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 ELOAQ14241 798 aaKnown RBP13.62□□□□□ -0.23
LMBR1-201ENST00000353442 GALNT3Q14435 633 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 IRGCQ6NXR0 463 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 DEF8Q6ZN54 512 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 ZBTB49Q6ZSB9 765 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 FBXO33Q7Z6M2 555 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 ADGRG6Q86SQ4 1221 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 ANKFN1Q8N957 763 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 CCSER1Q9C0I3 900 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 CCDC167Q9P0B6 97 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 DMGDHQ9UI17 866 aaKnown RBP13.62□□□□□ -0.23
LMBR1-201ENST00000353442 HYKKA2RU49 373 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 RPA1P27694 616 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 GABRR2P28476 465 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 GPR158Q5T848 1215 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 FBXO15Q8NCQ5 510 aaPredicted RBP13.62□□□□□ -0.23
LMBR1-201ENST00000353442 NSMCE2Q96MF7 247 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 NDUFAF1Q9Y375 327 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 PCDHB11Q9Y5F2 797 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 GAKO14976 1311 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 KCNH1O95259 989 aa13.62□□□□□ -0.23
LMBR1-201ENST00000353442 DNASE1L1P49184 302 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms