RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 TLK1Q9UKI8 766 aa18.02■□□□□ 0.47
LRCH3-201ENST00000334859 TK2O00142 265 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 AP3B1O00203 1094 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 LIN7AO14910 233 aaPredicted RBP18.01■□□□□ 0.47
LRCH3-201ENST00000334859 GPR182O15218 404 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 PHGDHO43175 533 aaKnown RBP18.01■□□□□ 0.47
LRCH3-201ENST00000334859 MSI1O43347 362 aaKnown RBP18.01■□□□□ 0.47
LRCH3-201ENST00000334859 TRIM13O60858 407 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 DUSP11O75319 330 aaKnown RBP18.01■□□□□ 0.47
LRCH3-201ENST00000334859 SMNDC1O75940 238 aaKnown RBP eCLIP18.01■□□□□ 0.477e-6■■□□□ 11.8
LRCH3-201ENST00000334859 MYCNP04198 464 aaPredicted RBP18.01■□□□□ 0.47
LRCH3-201ENST00000334859 YY1P25490 414 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 PGGT1BP53609 377 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 FAM171BQ6P995 826 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 OR10T2Q8NGX3 314 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 ZSCAN18Q8TBC5 510 aaPredicted RBP18.01■□□□□ 0.47
LRCH3-201ENST00000334859 TBL1YQ9BQ87 522 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 CYP4F11Q9HBI6 524 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.01■□□□□ 0.47
LRCH3-201ENST00000334859 E9PBE3 544 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 MAP3K7O43318 606 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 DCXO43602 365 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 KLHL41O60662 606 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 AVPR1AP37288 418 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 THPOP40225 353 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 USP10Q14694 798 aaKnown RBP18.01■□□□□ 0.47
LRCH3-201ENST00000334859 TDRD5Q8NAT2 981 aaKnown RBP18.01■□□□□ 0.47
LRCH3-201ENST00000334859 TRPV1Q8NER1 839 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 OR6Y1Q8NGX8 325 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 DPF3Q92784 378 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 GPR22Q99680 433 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 TRIM62Q9BVG3 475 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 ACE2Q9BYF1 805 aaPredicted RBP18.01■□□□□ 0.47
LRCH3-201ENST00000334859 OSBPL2Q9H1P3 480 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 ACSS2Q9NR19 701 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 PADI3Q9ULW8 664 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 NEU3Q9UQ49 428 aa18.01■□□□□ 0.47
LRCH3-201ENST00000334859 AAR2Q9Y312 384 aaKnown RBP18.01■□□□□ 0.47
LRCH3-201ENST00000334859 A0A088AWK7 358 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 TMEM114B3SHH9 223 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 IRAK2O43187 625 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 PAGE1O75459 146 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 SKIP12755 728 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 GLRBP48167 497 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 EPHB1P54762 984 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 RALGPS1Q5JS13 557 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 OVOS1Q6IE37 1185 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 SERINC5Q86VE9 423 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 LRRTM3Q86VH5 581 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 ZC3HC1Q86WB0 502 aaKnown RBP18■□□□□ 0.47
LRCH3-201ENST00000334859 PHTF2Q8N3S3 785 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 SHKBP1Q8TBC3 707 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 CMTM5Q96DZ9 223 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 ZNF419Q96HQ0 510 aaPredicted RBP18■□□□□ 0.47
LRCH3-201ENST00000334859 FICDQ9BVA6 458 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 KIFC1Q9BW19 673 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 RHOJQ9H4E5 214 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 NSMCE4AQ9NXX6 385 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 SCN10AQ9Y5Y9 1956 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 PSMD3O43242 534 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 MGEA5O60502 916 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 KPNA6O60684 536 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 H2AFYO75367 372 aaKnown RBP18■□□□□ 0.47
LRCH3-201ENST00000334859 SKAP2O75563 359 aaPredicted RBP18■□□□□ 0.47
LRCH3-201ENST00000334859 MOCS2O96007 188 aaPredicted RBP18■□□□□ 0.47
LRCH3-201ENST00000334859 AP2B1P63010 937 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 SCYL1Q96KG9 808 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 TTC1Q99614 292 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 MCMBPQ9BTE3 642 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 GATA5Q9BWX5 397 aaPredicted RBP18■□□□□ 0.47
LRCH3-201ENST00000334859 SFMBT1Q9UHJ3 866 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 MID2Q9UJV3 735 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 LRCH1Q9Y2L9 728 aa18■□□□□ 0.47
LRCH3-201ENST00000334859 GTF3C5Q9Y5Q8 519 aaPredicted RBP18■□□□□ 0.47
LRCH3-201ENST00000334859 LOC100653049A0A140TA62 436 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 KRT34O76011 436 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 VAPBO95292 243 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 BAG2O95816 211 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 CHRNGP07510 517 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 ANPEPP15144 967 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 CCNCP24863 283 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 CYP2C18P33260 490 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 HADHAP40939 763 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 ZNF157P51786 506 aaPredicted RBP17.99■□□□□ 0.47
LRCH3-201ENST00000334859 TSPY1Q01534 308 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 KLC1Q07866 573 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 PEX6Q13608 980 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 SLC9B1Q4ZJI4 515 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 FSCBQ5H9T9 825 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 BTBD8Q5XKL5 378 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 MRPL10Q7Z7H8 261 aaKnown RBP17.99■□□□□ 0.47
LRCH3-201ENST00000334859 MYLK4Q86YV6 388 aaPredicted RBP17.99■□□□□ 0.47
LRCH3-201ENST00000334859 ARHGAP12Q8IWW6 846 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 CCDC124Q96CT7 223 aaKnown RBP17.99■□□□□ 0.47
LRCH3-201ENST00000334859 MOCOSQ96EN8 888 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 TSGA13Q96PP4 275 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 OXSMQ9NWU1 459 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 NDE1Q9NXR1 346 aa17.99■□□□□ 0.47
LRCH3-201ENST00000334859 ANXA9O76027 345 aa17.98■□□□□ 0.47
LRCH3-201ENST00000334859 NEBLO76041 1014 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms