RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 EPHX2P34913 555 aa18.33■□□□□ 0.53
SPSB4-201ENST00000310546 NFATC3Q12968 1075 aa18.33■□□□□ 0.53
SPSB4-201ENST00000310546 CDO1Q16878 200 aa18.33■□□□□ 0.53
SPSB4-201ENST00000310546 SEL1L3Q68CR1 1132 aa18.33■□□□□ 0.53
SPSB4-201ENST00000310546 HMBOX1Q6NT76 420 aa18.33■□□□□ 0.53
SPSB4-201ENST00000310546 TMCO5AQ8N6Q1 288 aa18.33■□□□□ 0.53
SPSB4-201ENST00000310546 ZBTB45Q96K62 511 aaPredicted RBP18.33■□□□□ 0.53
SPSB4-201ENST00000310546 CCDC138Q96M89 665 aa18.33■□□□□ 0.53
SPSB4-201ENST00000310546 SIAEQ9HAT2 523 aa18.33■□□□□ 0.53
SPSB4-201ENST00000310546 SFMBT1Q9UHJ3 866 aa18.33■□□□□ 0.53
SPSB4-201ENST00000310546 CLASP2O75122 1294 aaKnown RBP18.33■□□□□ 0.52
SPSB4-201ENST00000310546 CST3P01034 146 aaPredicted RBP18.33■□□□□ 0.52
SPSB4-201ENST00000310546 DENND1BQ6P3S1 775 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 MAMDC4Q6UXC1 1216 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 KCTD8Q6ZWB6 473 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 PQLC3Q8N755 202 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 CYGBQ8WWM9 190 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 LPGAT1Q92604 370 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 PEBP4Q96S96 227 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 HERC2P3Q9BVR0 1158 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 PALMDQ9NP74 551 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 ST14Q9Y5Y6 855 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 TRUB2O95900 331 aaKnown RBP18.33■□□□□ 0.52
SPSB4-201ENST00000310546 TFE3P19532 575 aaPredicted RBP18.33■□□□□ 0.52
SPSB4-201ENST00000310546 GSSP48637 474 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 NUMBP49757 651 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 CLDN10P78369 228 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 INAQ16352 499 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 MAP1SQ66K74 1059 aaPredicted RBP18.33■□□□□ 0.52
SPSB4-201ENST00000310546 BTLAQ7Z6A9 289 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 OFCC1Q8IZS5 231 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 CADM3Q8N126 398 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 CBR4Q8N4T8 237 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 FAM110BQ8TC76 370 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 SLC7A3Q8WY07 619 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 CEP170P1Q96L14 293 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 CISHQ9NSE2 258 aa18.33■□□□□ 0.52
SPSB4-201ENST00000310546 E7ENX8 843 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 KPNA4O00629 521 aaPredicted RBP18.32■□□□□ 0.52
SPSB4-201ENST00000310546 HDAC3O15379 428 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 LTFP02788 710 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 HMGCRP04035 888 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 CCNA2P20248 432 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 TCEA1P23193 301 aaKnown RBP18.32■□□□□ 0.52
SPSB4-201ENST00000310546 POLR2BP30876 1174 aaKnown RBP18.32■□□□□ 0.52
SPSB4-201ENST00000310546 YAP1P46937 504 aaKnown RBP18.32■□□□□ 0.52
SPSB4-201ENST00000310546 ZNF132P52740 706 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 BCAR1P56945 870 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 SESN2P58004 480 aaPredicted RBP18.32■□□□□ 0.52
SPSB4-201ENST00000310546 STILQ15468 1287 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 PHKG1Q16816 387 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 SUPT20HL1Q3ZLR7 823 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 ARHGEF16Q5VV41 709 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 PLD5Q8N7P1 536 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 TNIP2Q8NFZ5 429 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 EHD1Q9H4M9 534 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 BCL10O95999 233 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 CNTN2Q02246 1040 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 PRKCQQ04759 706 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 ZBTB17Q13105 803 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 TFDP2Q14188 446 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 SF3B4Q15427 424 aaKnown RBP eCLIP18.32■□□□□ 0.52
SPSB4-201ENST00000310546 CLPPQ16740 277 aaPredicted RBP18.32■□□□□ 0.52
SPSB4-201ENST00000310546 ZNF618Q5T7W0 954 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 CES3Q6UWW8 571 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 TAS1R3Q7RTX0 852 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 HACE1Q8IYU2 909 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 DOK1Q99704 481 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 DHX35Q9H5Z1 703 aaKnown RBP18.32■□□□□ 0.52
SPSB4-201ENST00000310546 ZBTB26Q9HCK0 441 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 ADARB2Q9NS39 739 aaKnown RBP18.32■□□□□ 0.52
SPSB4-201ENST00000310546 ARHGAP28Q9P2N2 729 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 IPO11Q9UI26 975 aaKnown RBP18.32■□□□□ 0.52
SPSB4-201ENST00000310546 CYTH4Q9UIA0 394 aa18.32■□□□□ 0.52
SPSB4-201ENST00000310546 PTBP2Q9UKA9 531 aaKnown RBP18.32■□□□□ 0.52
SPSB4-201ENST00000310546 CNOT6Q9ULM6 557 aaKnown RBP18.32■□□□□ 0.52
SPSB4-201ENST00000310546 FAM149AA5PLN7 773 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 ZNF839A8K0R7 811 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 KCNU1A8MYU2 1149 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 FAM155AB1AL88 458 aaPredicted RBP18.31■□□□□ 0.52
SPSB4-201ENST00000310546 DYNC1LI2O43237 492 aaPredicted RBP18.31■□□□□ 0.52
SPSB4-201ENST00000310546 JUNP05412 331 aaKnown RBP18.31■□□□□ 0.52
SPSB4-201ENST00000310546 NR4A1P22736 598 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 TKTP29401 623 aaKnown RBP18.31■□□□□ 0.52
SPSB4-201ENST00000310546 PSME3P61289 254 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 SNX29P2Q8IUI4 249 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 C4orf19Q8IY42 314 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 RAVER1Q8IY67 606 aaKnown RBP18.31■□□□□ 0.52
SPSB4-201ENST00000310546 TSPAN18Q96SJ8 248 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 CGREF1Q99674 301 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 EFHD1Q9BUP0 239 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 ZFYVE28Q9HCC9 887 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 GPATCH2LQ9NWQ4 482 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 NXF1Q9UBU9 619 aaKnown RBP18.31■□□□□ 0.52
SPSB4-201ENST00000310546 POU2F3Q9UKI9 436 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 CCDC162PA2VCL2 907 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 TCAF2A6NFQ2 919 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.31■□□□□ 0.52
SPSB4-201ENST00000310546 TPST1O60507 370 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 SNAP91O60641 907 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms