RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 TRNAU1APQ9NX07 287 aaKnown RBP13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 VTI1BQ9UEU0 232 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 A0A096LPK6 155 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 SOCS2O14508 198 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 GIPC1O14908 333 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 MDM4O15151 490 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 PAPSS1O43252 624 aaPredicted RBP13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 MPOP05164 745 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 JUNP05412 331 aaKnown RBP13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 CKMT2P17540 419 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 CYP2F1P24903 491 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 PTPN11Q06124 597 aaPredicted RBP13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 PRKAA1Q13131 559 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 FGD3Q5JSP0 725 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 ARHGEF16Q5VV41 709 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 EEPD1Q7L9B9 569 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 ZNF786Q8N393 782 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 MFSD2AQ8NA29 543 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 CLIP3Q96DZ5 547 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 PRMT6Q96LA8 375 aaPredicted RBP13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 IL22Q9GZX6 179 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 UNC93B1Q9H1C4 597 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 NOL11Q9H8H0 719 aaKnown RBP13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 SYBUQ9NX95 663 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 NXF1Q9UBU9 619 aaKnown RBP13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 SARDHQ9UL12 918 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 TRIM17Q9Y577 477 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 ANKRD31Q8N7Z5 1873 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 E7ENX8 843 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 SLCO1B7G3V0H7 640 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 DLGAP1O14490 977 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 DPYSL4O14531 572 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 PIGNO95427 931 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 HOXC6P09630 235 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 BMP2P12643 396 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 CCR10P46092 362 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 RPS3AP61247 264 aaKnown RBP13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 PRAMEP78395 509 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 TFAMQ00059 246 aaKnown RBP13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 KIZQ2M2Z5 673 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 ARL13AQ5H913 290 aaPredicted RBP13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 TREML2Q5T2D2 321 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 HEATR6Q6AI08 1181 aaKnown RBP13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 NEPROQ6NW34 567 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 SCYL2Q6P3W7 929 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 TTC33Q6PID6 262 aaPredicted RBP13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 KCNT2Q6UVM3 1135 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 ABHD15Q6UXT9 468 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 ZPBP2Q6X784 338 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 FAM183BPQ6ZVS7 135 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 MOCOSQ96EN8 888 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 JPH1Q9HDC5 661 aaPredicted RBP13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 PIH1D1Q9NWS0 290 aaKnown RBP13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 HMGXB4Q9UGU5 601 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 ZDHHC2Q9UIJ5 367 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 MID2Q9UJV3 735 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 DOCK5Q9H7D0 1870 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 GNAO1P09471 354 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 SPRP35270 261 aaPredicted RBP13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 GRIA4P48058 902 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 BMXP51813 675 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 PRKCQQ04759 706 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 PMS2P3Q13401 168 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 ATP1A4Q13733 1029 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 RAB39AQ14964 217 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 INAQ16352 499 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 LIPMQ5VYY2 423 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 FSTL4Q6MZW2 842 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 ANKRD26P1Q6NSI1 321 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 XRRA1Q6P2D8 792 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 VSIG10LQ86VR7 867 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 PACRGLQ8N7B6 248 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 LPGAT1Q92604 370 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 TDRD1Q9BXT4 1180 aaKnown RBP13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 CCDC68Q9H2F9 335 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 SMOXQ9NWM0 555 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 UBR3Q6ZT12 1888 aa13.72□□□□□ -0.21
RPUSD4-201ENST00000298317 A0A0A0MRY4 1105 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 ESRRBO95718 433 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 NR2C2P49116 596 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 CDH8P55286 799 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 ACTR2P61160 394 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 SP4Q02446 784 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 BNIP3Q12983 259 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 CAMK2BQ13554 666 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 SURF1Q15526 300 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 SPANXN3Q5MJ09 141 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 C6orf10Q5SRN2 563 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 GPR107Q5VW38 600 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 NXNQ6DKJ4 435 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 ZYG11AQ6WRX3 759 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 ZBTB33Q86T24 672 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 PCDH20Q8N6Y1 951 aaKnown RBP13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 SCAIQ8N9R8 606 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 RNF169Q8NCN4 708 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 TRUB1Q8WWH5 349 aaKnown RBP13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 CASP10Q92851 521 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 SPATA13Q96N96 652 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 EFHD1Q9BUP0 239 aa13.71□□□□□ -0.21
RPUSD4-201ENST00000298317 ELOVL4Q9GZR5 314 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms