RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Fam198bQ3UPI1 517 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Armcx5Q3UZB0 606 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Tha1Q6XPS7 400 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Ldhal6bQ8BVP2 382 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 TbcdQ8BYA0 1196 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Gtf2e2Q9D902 292 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Ighv11-2A0A075B5R8 117 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 MaffO54791 156 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 C6.1alQ7M757 291 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Nsun6Q7TS68 476 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Ppil2Q9D787 521 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Mid2Q9QUS6 705 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Tarbp1E9Q368 1579 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Fam46dB1ATX6 390 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Xpnpep3B7ZMP1 506 aaKnown RBP10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Gm3642K7N6V4 267 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Gm8374L7N2A9 172 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Cbx2P30658 519 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Ssxb10Q6XAR7 170 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Ssxb5Q6XAS2 159 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Impg1Q8R1W8 798 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Pcdhga9Q91XX9 932 aa10.56□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Disp2Q8CIP5 1345 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Gm29394H3BIW7 199 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 LtfP08071 707 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Swsap1Q8VCI7 278 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Mroh2aD3Z750 1679 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Hps1O08983 704 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Il1rnP25085 178 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Nlrc4Q3UP24 1024 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Nob1Q8BW10 403 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Cyp4f13Q99N19 523 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Ints11Q9CWS4 600 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Mrps15Q9DC71 258 aaKnown RBP10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 FancgQ9EQR6 623 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Vav3Q9R0C8 847 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Vmn2r27D3YUK6 857 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Chil3O35744 398 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Tnfsf9P41274 309 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Khdc4Q3TCX3 612 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 MogQ61885 246 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Txndc15Q6P6J9 344 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Ttc16Q8C1F5 767 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Ces2cQ91WG0 561 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Snx10Q9CWT3 201 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Ankef1Q9D2J7 775 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 PigoQ9JJI6 1093 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Card9A2AIV8 536 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Ttll8A4Q9F1 832 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Lrrc73B2RWC4 316 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Vmn2r19G5E8G4 854 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Tas2r104Q7M723 302 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Mrps7Q80X85 242 aaKnown RBP10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Mcm8Q9CWV1 833 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Wdr55Q9CX97 388 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Bloc1s6Q9R0C0 172 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 KlO35082 1014 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Stk16O88697 305 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Il13ra2O88786 383 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Zmynd11Q8R5C8 602 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Hdhd5Q91WM2 419 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Znf354bQ9QXT9 601 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Ulk2Q9QY01 1037 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Myo5cE9Q1F5 1742 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Pcdh7A0A0A6YY83 1255 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Ggta1l1A2AUQ7 319 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Srpk1O70551 648 aaKnown RBP10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Cyp2a4P15392 494 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Cyp2a5P20852 494 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Rnaseh2bQ80ZV0 308 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Nt5dc1Q8C5P5 467 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Adgrl4Q923X1 739 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Pgam1Q9DBJ1 254 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Panx1Q9JIP4 426 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Zscan5bB2RTN3 468 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Smim22J3QP37 91 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 FesP16879 822 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Txndc8Q69AB2 127 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Scara3Q8C850 606 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Tbc1d14Q8CGA2 694 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Depdc1aQ8CIG0 804 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Ubiad1Q9DC60 336 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Aldh9a1Q9JLJ2 494 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 4933408B17RikG3X9B4 273 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Ugt1a6bK9J7B2 531 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Hnf4aP49698 474 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Snai1Q02085 264 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Fam98aQ3TJZ6 515 aaKnown RBP10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Fam20cQ5MJS3 579 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Ugt1a6Q64435 531 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Gpatch2lQ6PE65 482 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Ugt1a7cQ6ZQM8 531 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Ints6lQ8BND4 861 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Ctxn3Q8BXZ0 80 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 CherpQ8CGZ0 936 aaKnown RBP10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Serpinb1aQ9D154 379 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Echdc3Q9D7J9 300 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Dnajb2Q9QYI5 324 aa10.55□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Gm20695H3BLK7 282 aa10.54□□□□□ -0.72
Scn9a-201ENSMUST00000100063 Gm14496K7N5U4 849 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms