RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Prl7d1P04769 244 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Hoxb1P17919 297 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Pou1f1Q00286 291 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Slc45a4Q0P5V9 785 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Q32M26 199 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Trpc5osQ3UHV4 110 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 E2f8Q58FA4 860 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Usp50Q6P8X6 390 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Dlgap3Q6PFD5 977 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Tas2r134Q7TQB0 298 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Glrx5Q80Y14 152 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Slc16a12Q8BGC3 486 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Trim47Q8C0E3 641 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Adgra1Q8C4G9 578 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Parp9Q8CAS9 866 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ufl1Q8CCJ3 793 aaKnown RBP9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Slc26a6Q8CIW6 758 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 NraddQ8CJ26 228 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Dlg2Q91XM9 852 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Pcdhb5Q91XZ5 792 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Hemk1Q921L7 340 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Cdc26Q99JP4 85 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Trim16Q99PP9 556 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Dph6Q9CQ28 267 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Akt1s1Q9D1F4 257 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Haus5Q9D786 619 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Smpd3Q9JJY3 655 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ptk2bQ9QVP9 1009 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Cyp11a1Q9QZ82 526 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Cyp2t4E9PWV0 503 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Zfp946F6VWU8 523 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gp5O08742 567 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Nfil3O08750 462 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Tnfrsf11aO35305 625 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Kpna4O35343 521 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Sult2b1O35400 338 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Kcnk4O88454 398 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Syn1O88935 706 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Nr4a1P12813 601 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Hoxd9P28357 339 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 TaglnP37804 201 aaKnown RBP9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 AcadmP45952 421 aaKnown RBP9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ccna2P51943 422 aaKnown RBP9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Rin3P59729 980 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Plbd2Q3TCN2 594 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Wdr70Q3TWF6 657 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Mdh1bQ5F204 500 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Pik3r5Q5SW28 871 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ugt2a2Q6PDD0 528 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Olfr293Q7TS10 336 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Nsun6Q7TS68 476 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Uba6Q8C7R4 1053 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Lmbrd1Q8K0B2 537 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Pdik1lQ8QZR7 341 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Dedd2Q8QZV0 330 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Angptl7Q8R1Q3 337 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Evi2bQ8VD58 444 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 MlphQ91V27 590 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 SncaipQ99ME3 962 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Rprd1bQ9CSU0 326 aaKnown RBP9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Q9DAD0 168 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 AcadsbQ9DBL1 432 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Rai2Q9QVY8 529 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ehd3Q9QXY6 535 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 BcamQ9R069 622 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 H2-BlV9GXR0 257 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gm4924A0A1B0GR71 966 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 XntrpcF8VQM8 1264 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Rad51ap2G3UW63 976 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Per1O35973 1291 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 AurkbO70126 345 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gpr50O88495 591 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Etv1P41164 477 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Cdc25cP48967 447 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Msx2Q03358 267 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Spg7Q3ULF4 781 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Itga7Q61738 1179 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Hist2h2acQ64523 129 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 ChpfQ6IQX7 774 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gimap8Q75N62 688 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Zfp184Q7TSH9 737 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Clvs2Q8BG92 327 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Tab1Q8CF89 502 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Saysd1Q8K190 188 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Mob2Q8VI63 235 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Far1Q922J9 515 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ifitm3Q9CQW9 137 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Upk1aQ9D132 257 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 TbcbQ9D1E6 244 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Tchhl1Q9D3P1 638 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Rnf225Q9D7D1 332 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Plscr2Q9DCW2 307 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Pdzk1Q9JIL4 519 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Myl7Q9QVP4 175 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ndrg3Q9QYF9 375 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Il18rapQ9Z2B1 614 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Dthd1E9PZX1 795 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gm8267E9Q207 261 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Esp34G3UXG0 151 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gm21972J3QN38 98 aa9.88□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms