RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 E230025N22RikG5E8S3 482 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Gm10354K7N6A0 256 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 EsrraO08580 422 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Serpinb9eO08806 377 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Ercc2O08811 760 aaKnown RBP10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Cct8P42932 548 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Plk2P53351 682 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Mpp1P70290 466 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Polr2cP97760 275 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Adamts1P97857 968 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Pecam1Q08481 727 aaKnown RBP10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Mrgprb1Q3UG61 350 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Nek10Q3UGM2 1111 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Foxred2Q3USW5 665 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Nxpe4Q52KP5 543 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Slc5a10Q5SWY8 596 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Nab1Q61122 486 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Slc26a2Q62273 739 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 EfsQ64355 560 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Armcx2Q6A058 784 aaKnown RBP10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 ScapQ6GQT6 1276 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Gemin4Q6P6L6 1058 aaKnown RBP10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Abhd10Q6PE15 297 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Rmnd1Q8CI78 450 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 HpdlQ8K248 371 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Pcdhb2Q91Y00 799 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Dctn2Q99KJ8 402 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Prl7c1Q9CRB5 251 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Sesn3Q9CYP7 492 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Trpc7Q9WVC5 862 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Morc3F7BJB9 942 aaKnown RBP10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 CenpaO35216 134 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Dsg3O35902 993 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Slc6a13P31649 602 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Nploc4P60670 608 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Ano7Q14AT5 859 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 PrkciQ62074 595 aaKnown RBP10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Ankrd6Q69ZU8 712 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Mis18bp1Q80WQ8 998 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Plin5Q8BVZ1 463 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 SowahcQ8C0J6 512 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Galnt5Q8C102 930 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Vmn1r213Q8R278 384 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Polr3eQ9CZT4 710 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 GghQ9Z0L8 317 aa10.86□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Col11a1Q61245 1804 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 A930018M24RikB7ZMY3 218 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Gm10639E9Q6L7 222 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Rhox6O70238 227 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Hoxd10P28359 340 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Tac1P41539 130 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Mxd1P50538 227 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 PolgP54099 1218 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 NxnP97346 435 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 McuQ3UMR5 350 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 CybbQ61093 570 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Map3k7Q62073 579 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Efr3bQ6ZQ18 817 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Olfr533Q7TRT7 320 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Olfr212Q7TS33 327 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Dnajc16Q80TN4 772 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Ppme1Q8BVQ5 386 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Castor2Q8CAB8 329 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Mtif2Q91YJ5 727 aaKnown RBP10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Ak5Q920P5 562 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Ndufa10Q99LC3 355 aaKnown RBP10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 CabyrQ9D424 453 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Tekt1Q9DAJ2 418 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Ropn1Q9ESG2 212 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 RalbQ9JIW9 206 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Trpm5Q9JJH7 1158 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 PolhQ9JJN0 694 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 PignQ9R1S3 931 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Ern2Q9Z2E3 911 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Znf711A2ANX9 761 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Zfp384E9Q1A5 584 aaKnown RBP10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Zfp780bE9Q2S6 806 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Grip2G3XA20 1042 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Znf683I7HJS4 458 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Gm3336J3QMQ6 198 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Ptpn9O35239 593 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 BhmtO35490 407 aaKnown RBP10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Ppef1O35655 650 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Rpl5P47962 297 aaKnown RBP10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 PhgdhQ61753 533 aaKnown RBP10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 PostnQ62009 838 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Lrrc27Q80YS5 523 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Cnot6Q8K3P5 557 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Grk2Q99MK8 689 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Actrt2Q9D9L5 377 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Ube4bQ9ES00 1173 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Map3k6Q9WTR2 1291 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Slc23a1Q9Z2J0 605 aa10.85□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Gm21083A0A0G2JFD5 256 aa10.84□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Gm21149A0A0G2JFY7 255 aa10.84□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Speer4cG3UXD1 256 aa10.84□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Fignl2J3QK54 644 aa10.84□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Speer4eK7N6S8 255 aa10.84□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Gm17019K7N6W5 255 aa10.84□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 P01650 108 aa10.84□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms