RNA–Protein interactions for RNA: ENST00000625395.1

SEC23A-215, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 5 BASIC

Gene SEC23A, Length 261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-215ENST00000625395 PCDHB2Q9Y5E7 798 aa4.33□□□□□ -1.72
SEC23A-215ENST00000625395 RGPD2P0DJD1 1756 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 RAB3GAP2Q9H2M9 1393 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 COL6A3P12111 3177 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 TRBV5-3A0A0A0MS03 114 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 CD8B2A6NJW9 211 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 NTSR2O95665 410 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 NDST3O95803 873 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 EEF1GP26641 437 aaKnown RBP4.32□□□□□ -1.72
SEC23A-215ENST00000625395 IL6STP40189 918 aaPredicted RBP4.32□□□□□ -1.72
SEC23A-215ENST00000625395 ALDH7A1P49419 539 aaKnown RBP4.32□□□□□ -1.72
SEC23A-215ENST00000625395 VPS41P49754 854 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 EIF5P55010 431 aaKnown RBP4.32□□□□□ -1.72
SEC23A-215ENST00000625395 GAB1Q13480 694 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 CSHL1Q14406 222 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 SLC35G1Q2M3R5 365 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 CCDC181Q5TID7 509 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 IZUMO3Q5VZ72 239 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 C9orf47Q6ZRZ4 202 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 RASGRP3Q8IV61 690 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 TXLNBQ8N3L3 684 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 FAM47BQ8NA70 645 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 ZFPM2Q8WW38 1151 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 MASTLQ96GX5 879 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 CCDC136Q96JN2 1154 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 FAM50BQ9Y247 325 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 BRCA2P51587 3418 aa4.32□□□□□ -1.72
SEC23A-215ENST00000625395 EDC4Q6P2E9 1401 aaKnown RBP4.31□□□□□ -1.72
SEC23A-215ENST00000625395 TONSLQ96HA7 1378 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 TRIOBPQ9H2D6 2365 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 IGLV5-39A0A0G2JS06 123 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 FAM234BA2RU67 622 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 FAM90A8PA6NJQ4 464 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 ZNF814B7Z6K7 855 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 H0YGN5 161 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 NPC1O15118 1278 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 CAND2O75155 1236 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 FGF2P09038 288 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 FAM90A13PP0C7W8 464 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 FAM90A24PP0C7X0 464 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 PSG1P11464 419 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 AKR1A1P14550 325 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 PECAM1P16284 738 aaPredicted RBP4.31□□□□□ -1.72
SEC23A-215ENST00000625395 TNFSF4P23510 183 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 TBXAS1P24557 533 aaPredicted RBP4.31□□□□□ -1.72
SEC23A-215ENST00000625395 GNALP38405 381 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 AGTR2P50052 363 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 AK2P54819 239 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 HUNKP57058 714 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 PMS2P11Q13670 270 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 ELF2Q15723 593 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 MANEAQ5SRI9 462 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 ISM2Q6H9L7 571 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 RGMBQ6NW40 437 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 LVRNQ6Q4G3 990 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 ZNF474Q6S9Z5 364 aaPredicted RBP4.31□□□□□ -1.72
SEC23A-215ENST00000625395 USP50Q70EL3 339 aaPredicted RBP4.31□□□□□ -1.72
SEC23A-215ENST00000625395 CCAR1Q8IX12 1150 aaKnown RBP4.31□□□□□ -1.72
SEC23A-215ENST00000625395 OR2C3Q8N628 320 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 ZNF548Q8NEK5 533 aaPredicted RBP4.31□□□□□ -1.72
SEC23A-215ENST00000625395 CLMNQ96JQ2 1002 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 FAR2Q96K12 515 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 MARK4Q96L34 752 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.31□□□□□ -1.729e-8■■■□□ 17.1
SEC23A-215ENST00000625395 MOV10Q9HCE1 1003 aaKnown RBP4.31□□□□□ -1.72
SEC23A-215ENST00000625395 GJB4Q9NTQ9 266 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 ZBTB40Q9NUA8 1239 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 FBXO28Q9NVF7 368 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 NFU1Q9UMS0 254 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 VPS4AQ9UN37 437 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 PCDHB7Q9Y5E2 793 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 LTBP1Q14766 1721 aa4.31□□□□□ -1.72
SEC23A-215ENST00000625395 CCDC88AQ3V6T2 1871 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 RANBP2P49792 3224 aaKnown RBP4.3□□□□□ -1.72
SEC23A-215ENST00000625395 COL4A5P29400 1685 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 KIR2DS5A0A0G2JLQ3 304 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 KIR2DS3K7RE56 304 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 HARSP12081 509 aaKnown RBP4.3□□□□□ -1.72
SEC23A-215ENST00000625395 ST6GAL1P15907 406 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 STAT6P42226 847 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 CXCL9Q07325 125 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 EIF4A2Q14240 407 aaKnown RBP4.3□□□□□ -1.72
SEC23A-215ENST00000625395 ARHGAP15Q53QZ3 475 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 MSANTD2Q6P1R3 559 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 FBXO38Q6PIJ6 1188 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 SRFBP1Q8NEF9 429 aaKnown RBP4.3□□□□□ -1.72
SEC23A-215ENST00000625395 ZNF566Q969W8 418 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 LYZL4Q96KX0 146 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 RIPOR3Q96MK2 946 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 TESK2Q96S53 571 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 DECR2Q9NUI1 292 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 SAGE1Q9NXZ1 904 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 POLKQ9UBT6 870 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 IPO11Q9UI26 975 aaKnown RBP4.3□□□□□ -1.72
SEC23A-215ENST00000625395 PCDHA12Q9UN75 941 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 ITGB4P16144 1822 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 ADAMTSL1Q8N6G6 1762 aa4.3□□□□□ -1.72
SEC23A-215ENST00000625395 B4DGG1 531 aa4.29□□□□□ -1.72
SEC23A-215ENST00000625395 M0QZQ0 153 aa4.29□□□□□ -1.72
SEC23A-215ENST00000625395 TCERG1O14776 1098 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms