RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 SNAP91O60641 907 aa19.77■□□□□ 0.76
PNKP-207ENST00000596014 PAPSS2O95340 614 aaPredicted RBP19.77■□□□□ 0.76
PNKP-207ENST00000596014 HOXB2P14652 356 aa19.77■□□□□ 0.76
PNKP-207ENST00000596014 GLDCP23378 1020 aa19.77■□□□□ 0.76
PNKP-207ENST00000596014 STK19P49842 368 aaPredicted RBP19.77■□□□□ 0.76
PNKP-207ENST00000596014 ST8SIA6P61647 398 aa19.77■□□□□ 0.76
PNKP-207ENST00000596014 ANKRD20A8PQ5CZ79 823 aa19.77■□□□□ 0.76
PNKP-207ENST00000596014 SYCE1Q8N0S2 351 aa19.77■□□□□ 0.76
PNKP-207ENST00000596014 KDM1BQ8NB78 822 aa19.77■□□□□ 0.76
PNKP-207ENST00000596014 MYRIPQ8NFW9 859 aa19.77■□□□□ 0.76
PNKP-207ENST00000596014 PCDH19Q8TAB3 1148 aa19.77■□□□□ 0.76
PNKP-207ENST00000596014 PRMT8Q9NR22 394 aaPredicted RBP19.77■□□□□ 0.76
PNKP-207ENST00000596014 ETNK2Q9NVF9 386 aa19.77■□□□□ 0.76
PNKP-207ENST00000596014 MFHAS1Q9Y4C4 1052 aa19.77■□□□□ 0.76
PNKP-207ENST00000596014 CKAP5Q14008 2032 aa19.77■□□□□ 0.75
PNKP-207ENST00000596014 C3orf70A6NLC5 250 aaPredicted RBP19.76■□□□□ 0.75
PNKP-207ENST00000596014 RASA4BC9J798 803 aa19.76■□□□□ 0.75
PNKP-207ENST00000596014 CBX4O00257 560 aa19.76■□□□□ 0.75
PNKP-207ENST00000596014 RASA4O43374 803 aa19.76■□□□□ 0.75
PNKP-207ENST00000596014 ZMPSTE24O75844 475 aa19.76■□□□□ 0.75
PNKP-207ENST00000596014 PRKCHP24723 683 aa19.76■□□□□ 0.75
PNKP-207ENST00000596014 MARCKSL1P49006 195 aa19.76■□□□□ 0.75
PNKP-207ENST00000596014 DGKEP52429 567 aa19.76■□□□□ 0.75
PNKP-207ENST00000596014 NDST2P52849 883 aa19.76■□□□□ 0.75
PNKP-207ENST00000596014 PARP15Q460N3 678 aa19.76■□□□□ 0.75
PNKP-207ENST00000596014 TMCO3Q6UWJ1 677 aa19.76■□□□□ 0.75
PNKP-207ENST00000596014 NT5DC3Q86UY8 548 aa19.76■□□□□ 0.75
PNKP-207ENST00000596014 NPWQ8N729 165 aa19.76■□□□□ 0.75
PNKP-207ENST00000596014 KRT35Q92764 455 aa19.76■□□□□ 0.75
PNKP-207ENST00000596014 FAF2Q96CS3 445 aa19.76■□□□□ 0.75
PNKP-207ENST00000596014 CELF6Q96J87 481 aaKnown RBP19.76■□□□□ 0.75
PNKP-207ENST00000596014 LRRC19Q9H756 370 aa19.76■□□□□ 0.75
PNKP-207ENST00000596014 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.76■□□□□ 0.75
PNKP-207ENST00000596014 RAD54BQ9Y620 910 aa19.76■□□□□ 0.75
PNKP-207ENST00000596014 CACNA1HO95180 2353 aa19.76■□□□□ 0.75
PNKP-207ENST00000596014 A0A1W2PQF6 199 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 K7ESF4 209 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 KRT1P04264 644 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 HLA-EP13747 358 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 COL9A1P20849 921 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 VASPP50552 380 aaPredicted RBP19.75■□□□□ 0.75
PNKP-207ENST00000596014 ANGPT1Q15389 498 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 ODF2Q5BJF6 829 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 AFMIDQ63HM1 303 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 TSSK4Q6SA08 328 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 PEX26Q7Z412 305 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 KATNAL2Q8IYT4 538 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 LZTR1Q8N653 840 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 ZNF366Q8N895 744 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 RNF25Q96BH1 459 aaPredicted RBP19.75■□□□□ 0.75
PNKP-207ENST00000596014 HMCESQ96FZ2 354 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 SLC39A8Q9C0K1 460 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 SLC25A13Q9UJS0 675 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 FBXO4Q9UKT5 387 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 PCDHA3Q9Y5H8 950 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 KDELR3O43731 214 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 MT-CO1P00395 513 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 EPHX1P07099 455 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 CTNNA1P35221 906 aaKnown RBP19.75■□□□□ 0.75
PNKP-207ENST00000596014 NNMTP40261 264 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 ARF5P84085 180 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 CSTF1Q05048 431 aaKnown RBP19.75■□□□□ 0.75
PNKP-207ENST00000596014 RETSATQ6NUM9 610 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 KIAA1211LQ6NV74 962 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 LINGO4Q6UY18 593 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 VSIG1Q86XK7 387 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 ARHGAP12Q8IWW6 846 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 NETO2Q8NC67 525 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 RNF157Q96PX1 679 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 HHIPQ96QV1 700 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 CD248Q9HCU0 757 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 AMFRQ9UKV5 643 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 HPCAL4Q9UM19 191 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 HS3ST2Q9Y278 367 aa19.75■□□□□ 0.75
PNKP-207ENST00000596014 TTC34A8MYJ7 566 aa19.74■□□□□ 0.75
PNKP-207ENST00000596014 ZNF487B1APH4 448 aa19.74■□□□□ 0.75
PNKP-207ENST00000596014 SLC20A2Q08357 652 aa19.74■□□□□ 0.75
PNKP-207ENST00000596014 SERINC3Q13530 473 aa19.74■□□□□ 0.75
PNKP-207ENST00000596014 STARD3Q14849 445 aa19.74■□□□□ 0.75
PNKP-207ENST00000596014 ZNF354CQ86Y25 554 aa19.74■□□□□ 0.75
PNKP-207ENST00000596014 SH2D3CQ8N5H7 860 aa19.74■□□□□ 0.75
PNKP-207ENST00000596014 CAMKK1Q8N5S9 505 aa19.74■□□□□ 0.75
PNKP-207ENST00000596014 PQLC3Q8N755 202 aa19.74■□□□□ 0.75
PNKP-207ENST00000596014 ERLEC1Q96DZ1 483 aa19.74■□□□□ 0.75
PNKP-207ENST00000596014 PRRX2Q99811 253 aa19.74■□□□□ 0.75
PNKP-207ENST00000596014 SUN2Q9UH99 717 aa19.74■□□□□ 0.75
PNKP-207ENST00000596014 NYNRINQ9P2P1 1898 aaKnown RBP19.74■□□□□ 0.75
PNKP-207ENST00000596014 MUC6Q6W4X9 2439 aa19.73■□□□□ 0.75
PNKP-207ENST00000596014 CCDC66A2RUB6 948 aa19.73■□□□□ 0.75
PNKP-207ENST00000596014 ZSCAN12O43309 604 aa19.73■□□□□ 0.75
PNKP-207ENST00000596014 ZRANB2O95218 330 aaKnown RBP eCLIP19.73■□□□□ 0.75
PNKP-207ENST00000596014 FTCDO95954 541 aa19.73■□□□□ 0.75
PNKP-207ENST00000596014 SRCP12931 536 aa19.73■□□□□ 0.75
PNKP-207ENST00000596014 TDGF1P13385 188 aa19.73■□□□□ 0.75
PNKP-207ENST00000596014 CTNNA2P26232 953 aa19.73■□□□□ 0.75
PNKP-207ENST00000596014 PEX5P50542 639 aa19.73■□□□□ 0.75
PNKP-207ENST00000596014 MFSD7Q6UXD7 560 aa19.73■□□□□ 0.75
PNKP-207ENST00000596014 TP53INP2Q8IXH6 220 aa19.73■□□□□ 0.75
PNKP-207ENST00000596014 RCOR2Q8IZ40 523 aa19.73■□□□□ 0.75
PNKP-207ENST00000596014 ATP11CQ8NB49 1132 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms